4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/qacIndex/qacIndex.c src/hg/qacIndex/qacIndex.c
index 097aca7..2c777ab 100644
--- src/hg/qacIndex/qacIndex.c
+++ src/hg/qacIndex/qacIndex.c
@@ -1,72 +1,72 @@
 /* qacIndex - Index a qac file. */
 
 /* Copyright (C) 2007 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 #include "common.h"
 #include "linefile.h"
 #include "hash.h"
 #include "options.h"
 #include "qaSeq.h"
 
 struct qacIndex
     {
     struct qacIndex *next;
     char *name;   /* name of the sequence in the qac file */
     off_t offset; /* offset in the qac file */
     };
 
 void usage()
 /* Explain usage and exit. */
 {
 errAbort(
   "qacIndex - Index a qac file\n"
   "usage:\n"
   "   qacIndex in.qac out.qdx\n"
 );
 }
 
 void qacIndex(char *inQac, char *outQdx)
 /* qacIndex - Index a qac file. */
 {
 FILE *qacf, *qdxf;
 struct qaSeq *qa;
 struct qacIndex *indexList = NULL, *qaci;
 off_t offset;
 boolean isSwapped;
 int seqCount = 0;
 
 qacf = qacOpenVerify(inQac, &isSwapped);
 if ((offset = ftello(qacf)) == (off_t) -1)
     errnoAbort("ftello() failed\n");
 
 while((qa = qacReadNext(qacf, isSwapped)) != NULL)
     {
     seqCount++;
     AllocVar(qaci);
     qaci->name = cloneString(qa->name);
     qaci->offset = offset;
     slAddHead(&indexList, qaci);
     if ((offset = ftello(qacf)) == (off_t) -1)
         errnoAbort("ftello() failed\n");
     }
 carefulClose(&qacf);
 slReverse(&indexList);
 
 qdxf = mustOpen(outQdx, "w");
 fprintf(qdxf, "%d\n", seqCount);
 for(qaci = indexList; qaci != NULL; qaci = qaci->next)
     {
     fprintf(qdxf, "%s\t%ld\n", qaci->name, qaci->offset);
     free(qaci->name);
     }
 carefulClose(&qdxf);
 slFreeList(&indexList);
 }
 
 int main(int argc, char *argv[])
 {
 if (argc != 3)
     usage();
 qacIndex(argv[1], argv[2]);
 return EXIT_SUCCESS;
 }