4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/visiGene/vgPatchJax/vgPatchJax.c src/hg/visiGene/vgPatchJax/vgPatchJax.c index f82d99a..2500781 100644 --- src/hg/visiGene/vgPatchJax/vgPatchJax.c +++ src/hg/visiGene/vgPatchJax/vgPatchJax.c @@ -1,66 +1,66 @@ /* vgPatchJax - Patch Jackson labs part of visiGene database. */ /* Copyright (C) 2013 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #include "common.h" #include "linefile.h" #include "hash.h" #include "dystring.h" #include "options.h" #include "jksql.h" #include "portable.h" #include "obscure.h" #include "ra.h" void usage() /* Explain usage and exit. */ { errAbort( "vgPatchJax - Patch Jackson labs part of visiGene database\n" "usage:\n" " vgPatchJax database dir\n" "options:\n" " -xxx=XXX\n" ); } static struct optionSpec options[] = { {NULL, 0}, }; void vgPatchJax(char *database, char *dir) /* vgPatchJax - Patch Jackson labs part of visiGene database. */ { struct sqlConnection *conn = sqlConnect(database); struct fileInfo *raList, *ra; struct dyString *query = dyStringNew(0); raList = listDirX(dir, "*.ra", TRUE); for (ra = raList; ra != NULL; ra = ra->next) { struct hash *hash = raReadSingle(ra->name); char *submitSet = hashMustFindVal(hash, "submitSet"); char *year = hashMustFindVal(hash, "year"); dyStringClear(query); sqlDyStringPrintf(query, "update submissionSet set year=%s " "where name = '%s'" , year, submitSet); sqlUpdate(conn, query->string); } sqlDisconnect(&conn); } int main(int argc, char *argv[]) /* Process command line. */ { optionInit(&argc, argv, options); if (argc != 3) usage(); vgPatchJax(argv[1], argv[2]); return 0; }