4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/visiGene/visiGeneTest/visiGeneTest.c src/hg/visiGene/visiGeneTest/visiGeneTest.c
index efab36e..5847c02 100644
--- src/hg/visiGene/visiGeneTest/visiGeneTest.c
+++ src/hg/visiGene/visiGeneTest/visiGeneTest.c
@@ -1,108 +1,108 @@
 /* visiGeneTest - Test out visiGene database interface routines. */
 
 /* Copyright (C) 2011 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 #include "common.h"
 #include "linefile.h"
 #include "hash.h"
 #include "options.h"
 #include "jksql.h"
 #include "visiGene.h"
 
 
 void usage()
 /* Explain usage and exit. */
 {
 errAbort(
   "visiGeneTest - Test out visiGene database interface routines\n"
   "usage:\n"
   "   visiGeneTest database\n"
   "options:\n"
   "   -xxx=XXX\n"
   );
 }
 
 static struct optionSpec options[] = {
    {NULL, 0},
 };
 
 void printPaths(struct sqlConnection *conn, int image)
 /* Print out paths associated with image */
 {
 int imageWidth = 0, imageHeight=0;
 printf("full: %s\n", visiGeneFullSizePath(conn, image));
 visiGeneImageSize(conn, image, &imageWidth, &imageHeight);
 printf("width: %d height: %d\n", imageWidth, imageHeight);
 printf("thumb: %s\n", visiGeneThumbSizePath(conn, image));
 }
 
 void printAndFreeList(struct slName *list, char *label)
 /* Print and free list. */
 {
 struct slName *el;
 printf("%s:", label);
 for (el = list; el != NULL; el = el->next)
     printf(" %s", el->name);
 printf("\n");
 slFreeList(&list);
 }
 
 void printAndFreeIntList(struct slInt *list, char *label)
 /* Print and free list. */
 {
 struct slInt *el;
 printf("%s (%d):", label, slCount(list));
 for (el = list; el != NULL; el = el->next)
     printf(" %d", el->val);
 printf("\n");
 slFreeList(&list);
 }
 
 void visiGeneTest(char *database)
 /* visiGeneTest - Test out visiGene database interface routines. */
 {
 struct sqlConnection *conn = sqlConnect(database);
 int image = 17;
 
 //for (image=1; image < 100000; image *= 10)
     {
     printf("image #%d\n", image);
     printPaths(conn, image);
     printf("organism: %s\n", visiGeneOrganism(conn, image));
     printf("age: %s\n", visiGeneStage(conn, image, FALSE));
     printf("stage: %s\n", visiGeneStage(conn, image, TRUE));
     printAndFreeList(visiGeneGeneName(conn, image), "gene");
     printAndFreeList(visiGeneRefSeq(conn, image), "RefSeq");
     printAndFreeList(visiGeneGenbank(conn, image), "Genbank");
     printAndFreeList(visiGeneUniProt(conn, image), "UniProt");
     printf("submitId: %s\n", visiGeneSubmitId(conn, image));
     printf("fixation: %s\n", visiGeneFixation(conn, image));
     printf("embedding: %s\n", visiGeneEmbedding(conn, image));
     printf("permeablization: %s\n", visiGenePermeablization(conn, image));
     printf("contributors: %s\n", visiGeneContributors(conn, image));
     printf("publication: %s\n", visiGenePublication(conn, image));
     printf("pubUrl: %s\n", visiGenePubUrl(conn, image));
     printf("setUrl: %s\n", visiGeneSetUrl(conn, image));
     printf("itemUrl: %s\n", visiGeneItemUrl(conn, image));
     printAndFreeIntList(visiGeneSelectRefSeq(conn, "NM_010469"), "NM_010469");
     printAndFreeIntList(visiGeneSelectLocusLink(conn, "15436"), "LL 15436");
     printAndFreeIntList(visiGeneSelectGenbank(conn, "J03770"), "J03770");
     printAndFreeIntList(visiGeneSelectUniProt(conn, "P12345"), "UP P12345");
     printf("copyright: %s\n", visiGeneCopyright(conn, image));
 
     printf("\n");
     }
 
 sqlDisconnect(&conn);
 
 }
 
 int main(int argc, char *argv[])
 /* Process command line. */
 {
 optionInit(&argc, argv, options);
 if (argc != 2)
     usage();
 visiGeneTest(argv[1]);
 return 0;
 }