4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/utils/rmFaDups/rmFaDups.c src/utils/rmFaDups/rmFaDups.c index 60de721..53e564a 100644 --- src/utils/rmFaDups/rmFaDups.c +++ src/utils/rmFaDups/rmFaDups.c @@ -1,53 +1,53 @@ /* rmFaDups - remove duplicate records from FA file. */ /* Copyright (C) 2011 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #include "common.h" #include "fa.h" #include "hash.h" #include "obscure.h" void usage() /* Print usage and exit. */ { errAbort( "rmFaDups - remove duplicate records in FA file\n" "usage\n" " rmFaDups oldName.fa newName.fa\n"); } void rmFaDups(char *inFile, char *outFile) /* undupFa - remove duplicate records from FA file. */ { struct hash *uniq = newHash(0); struct hashEl *hel; char *name; FILE *in = mustOpen(inFile, "r"); FILE *out = mustOpen(outFile, "w"); DNA *dna; int size; while (faFastReadNext(in, &dna, &size, &name)) { if ((hel = hashLookup(uniq, name)) == NULL) { hashAdd(uniq, name, NULL); faWriteNext(out, name, dna, size); } else printf("removing duplicate %s\n", name); } fclose(in); fclose(out); } int main(int argc, char *argv[]) /* Process command line. */ { if (argc != 3) usage(); rmFaDups(argv[1], argv[2]); return 0; }