15973bdabacf5ddf5dd9289d05e83a7cd4080dbb braney Tue Nov 9 09:12:48 2021 -0800 support for bigRmsk from Robert Hubley robert.hubley@isbscience.org diff --git src/hg/hgc/hgc.c src/hg/hgc/hgc.c index 51845e0..d108877 100644 --- src/hg/hgc/hgc.c +++ src/hg/hgc/hgc.c @@ -26195,30 +26195,34 @@ { doHgGap(tdb, item); } else if (sameWord(table, "tet_waba")) { doHgTet(tdb, item); } else if (sameWord(table, "wabaCbr")) { doHgCbr(tdb, item); } else if (startsWith("rmskJoined", table)) { doJRepeat(tdb, item); } +else if (tdb != NULL && startsWith("bigRmsk", tdb->type)) + { + doBigRmskRepeat(tdb, item); + } else if (startsWith("rmsk", table)) { doHgRepeat(tdb, item); } else if (sameWord(table, "isochores")) { doHgIsochore(tdb, item); } else if (sameWord(table, "simpleRepeat")) { doSimpleRepeat(tdb, item); } else if (startsWith("cpgIsland", table)) { doCpgIsland(tdb, item);