e18510fd8cce5a41aac912da2ca49fa910e2bc5f markd Fri Nov 12 07:35:55 2021 -0800 updated doc for metabat common name fix diff --git src/hg/makeDb/trackDb/human/newChainNet.ra src/hg/makeDb/trackDb/human/newChainNet.ra index 821239e..8b44b87 100644 --- src/hg/makeDb/trackDb/human/newChainNet.ra +++ src/hg/makeDb/trackDb/human/newChainNet.ra @@ -1,22 +1,22 @@ track newChainNet compositeTrack on shortLabel New Chain/Net longLabel New Genomes, Chain and Net Alignments, need better packaging subGroup1 view Views chain=Chains net=Nets subGroup3 clade Clade aaprimate=Primate abrodent=Rodent acmammal=Mammal advertebrate=Vertebrate -subGroup2 species Species aaGreen_monkey=Green_monkey abHuman=Human acHuman=Human adTarsier=Tarsier aeChinese_tree_shrew=Chinese_tree_shrew afChinchilla=Chinchilla agLesser_Egyptian_jerboa=Lesser_Egyptian_jerboa ahGolden_hamster=Golden_hamster aiPrairie_vole=Prairie_vole ajBrush-tailed_rat=Brush-tailed_rat akCow=Cow alBactrian_camel=Bactrian_camel amDomestic_goat=Domestic_goat anCape_golden_mole=Cape_golden_mole aoStar-nosed_mole=Star-nosed_mole apArmadillo=Armadillo aqCape_elephant_shrew=Cape_elephant_shrew arBig_brown_bat=Big_brown_bat asHedgehog=Hedgehog atWeddell_seal=Weddell_seal auYangtze_river_dolphin=Yangtze_river_dolphin avWallaby=Wallaby awFerret_=Ferret_ axDavid_s_myotis_bat_=David_s_myotis_bat_ ayMicrobat=Microbat azPacific_walrus=Pacific_walrus baKiller_whale=Killer_whale bbAardvark=Aardvark bcTibetan_antelope=Tibetan_antelope bdAmur_tiger=Amur_tiger beSperm_whale=Sperm_whale bfBlack_flying-fox=Black_flying-fox bgShrew=Shrew bhManatee=Manatee biChinese_alligator=Chinese_alligator bjParrot=Parrot bkMallard_duck=Mallard_duck blSpiny_softshell_turtle=Spiny_softshell_turtle bmScarlet_macaw=Scarlet_macaw bnMexican_tetra_cavefish_=Mexican_tetra_cavefish_ boGreen_seaturtle=Green_seaturtle bpPainted_turtle=Painted_turtle bqRock_pigeon=Rock_pigeon brSaker_falcon=Saker_falcon bsPeregrine_falcon=Peregrine_falcon btCollared_flycatcher=Collared_flycatcher buBurton_s_mouthbreeder=Burton_s_mouthbreeder bvSpotted_gar=Spotted_gar bwZebra_mbuna=Zebra_mbuna bxPrincess_of_Burundi=Princess_of_Burundi byChinese_softshell_turtle=Chinese_softshell_turtle bzTibetan_ground_jay=Tibetan_ground_jay caPundamilia_nyererei=Pundamilia_nyererei cbZebra_finch=Zebra_finch ccYellowbelly_pufferfish=Yellowbelly_pufferfish cdX_tropicalis=X_tropicalis ceX_tropicalis=X_tropicalis cfSouthern_platyfish=Southern_platyfish cgWhite-throated_sparrow=White-throated_sparrow +subGroup2 species Species aaGreen_monkey=Green_monkey abHuman=Human acHuman=Human adTarsier=Tarsier aeChinese_tree_shrew=Chinese_tree_shrew afChinchilla=Chinchilla agLesser_Egyptian_jerboa=Lesser_Egyptian_jerboa ahGolden_hamster=Golden_hamster aiPrairie_vole=Prairie_vole ajBrush-tailed_rat=Brush-tailed_rat akCow=Cow alBactrian_camel=Bactrian_camel amDomestic_goat=Domestic_goat anCape_golden_mole=Cape_golden_mole aoStar-nosed_mole=Star-nosed_mole apArmadillo=Armadillo aqCape_elephant_shrew=Cape_elephant_shrew arBig_brown_bat=Big_brown_bat asHedgehog=Hedgehog atWeddell_seal=Weddell_seal auYangtze_river_dolphin=Yangtze_river_dolphin avWallaby=Wallaby awFerret_=Ferret_ axDavid_s_myotis_bat_=David_s_myotis_bat_ ayMicrobat=Little_brown_bat azPacific_walrus=Pacific_walrus baKiller_whale=Killer_whale bbAardvark=Aardvark bcTibetan_antelope=Tibetan_antelope bdAmur_tiger=Amur_tiger beSperm_whale=Sperm_whale bfBlack_flying-fox=Black_flying-fox bgShrew=Shrew bhManatee=Manatee biChinese_alligator=Chinese_alligator bjParrot=Parrot bkMallard_duck=Mallard_duck blSpiny_softshell_turtle=Spiny_softshell_turtle bmScarlet_macaw=Scarlet_macaw bnMexican_tetra_cavefish_=Mexican_tetra_cavefish_ boGreen_seaturtle=Green_seaturtle bpPainted_turtle=Painted_turtle bqRock_pigeon=Rock_pigeon brSaker_falcon=Saker_falcon bsPeregrine_falcon=Peregrine_falcon btCollared_flycatcher=Collared_flycatcher buBurton_s_mouthbreeder=Burton_s_mouthbreeder bvSpotted_gar=Spotted_gar bwZebra_mbuna=Zebra_mbuna bxPrincess_of_Burundi=Princess_of_Burundi byChinese_softshell_turtle=Chinese_softshell_turtle bzTibetan_ground_jay=Tibetan_ground_jay caPundamilia_nyererei=Pundamilia_nyererei cbZebra_finch=Zebra_finch ccYellowbelly_pufferfish=Yellowbelly_pufferfish cdX_tropicalis=X_tropicalis ceX_tropicalis=X_tropicalis cfSouthern_platyfish=Southern_platyfish cgWhite-throated_sparrow=White-throated_sparrow dragAndDrop subTracks visibility hide priority 103 group compGeno noInherit on color 0,0,0 altColor 255,255,0 type bed 3 chainLinearGap medium chainMinScore 5000 dimensions dimensionX=clade dimensionY=species sortOrder species=+ view=+ clade=+ configurable on html newChainNet