7e5840e03baf4a7b7c198016c393d0b86f7b72b6
braney
  Tue Nov 16 15:25:19 2021 -0800
allow hgc pages on chains to provide a link to the "other" browser if
the other assembly is an unattached genark assembly hub

diff --git src/hg/lib/genark.h src/hg/lib/genark.h
deleted file mode 100644
index 41e3dba..0000000
--- src/hg/lib/genark.h
+++ /dev/null
@@ -1,86 +0,0 @@
-/* genark.h was originally generated by the autoSql program, which also 
- * generated genark.c and genark.sql.  This header links the database and
- * the RAM representation of objects. */
-
-#ifndef GENARK_H
-#define GENARK_H
-
-#include "jksql.h"
-#define GENARK_NUM_COLS 6
-
-extern char *genarkCommaSepFieldNames;
-
-struct genark
-/* index to UCSC assembly hubs */
-    {
-    struct genark *next;  /* Next in singly linked list. */
-    char *gcAccession;	/* GC[AF] accssion identifier, e.g.: GCF_000001405.39 */
-    char *hubUrl;	/* path name to hub.txt: GCF/000/001/405/GCF_000001405.39/hub.txt */
-    char *asmName;	/* assembly name: GRCh38.p13 */
-    char *scientificName;	/* scientific name: Homo sapiens */
-    char *commonName;	/* common name: human */
-    int taxId;	/* taxon id: 9606 */
-    };
-
-void genarkStaticLoad(char **row, struct genark *ret);
-/* Load a row from genark table into ret.  The contents of ret will
- * be replaced at the next call to this function. */
-
-struct genark *genarkLoadByQuery(struct sqlConnection *conn, char *query);
-/* Load all genark from table that satisfy the query given.  
- * Where query is of the form 'select * from example where something=something'
- * or 'select example.* from example, anotherTable where example.something = 
- * anotherTable.something'.
- * Dispose of this with genarkFreeList(). */
-
-void genarkSaveToDb(struct sqlConnection *conn, struct genark *el, char *tableName, int updateSize);
-/* Save genark as a row to the table specified by tableName. 
- * As blob fields may be arbitrary size updateSize specifies the approx size
- * of a string that would contain the entire query. Arrays of native types are
- * converted to comma separated strings and loaded as such, User defined types are
- * inserted as NULL. This function automatically escapes quoted strings for mysql. */
-
-struct genark *genarkLoad(char **row);
-/* Load a genark from row fetched with select * from genark
- * from database.  Dispose of this with genarkFree(). */
-
-struct genark *genarkLoadAll(char *fileName);
-/* Load all genark from whitespace-separated file.
- * Dispose of this with genarkFreeList(). */
-
-struct genark *genarkLoadAllByChar(char *fileName, char chopper);
-/* Load all genark from chopper separated file.
- * Dispose of this with genarkFreeList(). */
-
-#define genarkLoadAllByTab(a) genarkLoadAllByChar(a, '\t');
-/* Load all genark from tab separated file.
- * Dispose of this with genarkFreeList(). */
-
-struct genark *genarkCommaIn(char **pS, struct genark *ret);
-/* Create a genark out of a comma separated string. 
- * This will fill in ret if non-null, otherwise will
- * return a new genark */
-
-void genarkFree(struct genark **pEl);
-/* Free a single dynamically allocated genark such as created
- * with genarkLoad(). */
-
-void genarkFreeList(struct genark **pList);
-/* Free a list of dynamically allocated genark's */
-
-void genarkOutput(struct genark *el, FILE *f, char sep, char lastSep);
-/* Print out genark.  Separate fields with sep. Follow last field with lastSep. */
-
-#define genarkTabOut(el,f) genarkOutput(el,f,'\t','\n');
-/* Print out genark as a line in a tab-separated file. */
-
-#define genarkCommaOut(el,f) genarkOutput(el,f,',',',');
-/* Print out genark as a comma separated list including final comma. */
-
-void genarkJsonOutput(struct genark *el, FILE *f);
-/* Print out genark in JSON format. */
-
-/* -------------------------------- End autoSql Generated Code -------------------------------- */
-
-#endif /* GENARK_H */
-