30e9677ddc4349e1f54dec3d406d7c229502c2ae
lrnassar
  Tue Nov 16 16:09:06 2021 -0800
Fixing up discrepancies between hive and tree for otto, refs #28331

diff --git src/hg/utils/otto/uniprot/bed12UniProtFullSeqBgp.as src/hg/utils/otto/uniprot/bed12UniProtFullSeqBgp.as
index 0e85e61..d67d888 100644
--- src/hg/utils/otto/uniprot/bed12UniProtFullSeqBgp.as
+++ src/hg/utils/otto/uniprot/bed12UniProtFullSeqBgp.as
@@ -1,48 +1,48 @@
 table bed12BgpUniProtAnnot
 "Browser extensible data (12 fields), eight fields for bigGenePred support, plus extra fields (dbName-pmids, not used by all UniProt subtracks) with UniProt-specific information"
     (
     string chrom;      "Chromosome (or contig, scaffold, etc.)"
     uint   chromStart; "Start position in chromosome"
     uint   chromEnd;   "End position in chromosome"
     string name;       "Name of item"
     uint   score;      "Score from 0-1000"
     char[1] strand;    "+ or -"
     uint thickStart;   "Start of where display should be thick (start codon)"
     uint thickEnd;     "End of where display should be thick (stop codon)"
     uint reserved;     "Used as itemRgb as of 2004-11-22"
     int blockCount;    "Number of blocks"
     int[blockCount] blockSizes; "Comma separated list of block sizes"
     int[blockCount] chromStarts; "Start positions relative to chromStart"
 
     string name2;               "Alternative/human readable name"
     string cdsStartStat;        "Status of CDS start annotation (none, unknown, incomplete, or complete)"
     string cdsEndStat;          "Status of CDS end annotation (none, unknown, incomplete, or complete)"
     int[blockCount] exonFrames; "Exon frame {0,1,2}, or -1 if no frame for exon"
     string type;                "Transcript type"
     string geneName;            "Primary identifier for gene"
     string geneName2;           "Alternative/human-readable gene name"
     string geneType;            "Gene type"
 
     string acc; "UniProt main accession"
     lstring uniprotName; "UniProt main record name"
     string status; "UniProt status"
     lstring accList; "UniProt all accessions"
     lstring isoIds; "UniProt isoform accessions"
 
     lstring protFullNames; "UniProt protein name"
     lstring protShortNames; "UniProt protein short name"
     lstring protAltFullNames; "UniProt alternative names"
     lstring protAltShortNames; "UniProt alternative short names"
     lstring geneNameDupl; "UniProt gene name"
     lstring geneSynonyms; "UniProt gene synonyms"
     lstring functionText; "UniProt function"
 
     lstring hgncSym; "HGNC Gene Symbol"
     lstring hgncId; "HGNC ID"
     lstring refSeq; "RefSeq IDs"
     lstring refSeqProt; "RefSeq Protein IDs"
     lstring entrezGene; "NCBI Entrez Gene"
     lstring ensGene; "Ensembl Gene IDs"
-    lstring ensTrans; "Ensembl Transcript IDs"
     lstring ensProt; "Ensembl Protein IDs"
+    lstring ensTrans; "Ensembl Transcript IDs"
     )