52366a76db92bb37d90bd4a941686685185558ee brianlee Mon Dec 27 10:39:34 2021 -0800 Adding a link to GenArk Blog posts from FAQ about finding assemblies diff --git src/hg/htdocs/FAQ/FAQreleases.html src/hg/htdocs/FAQ/FAQreleases.html index b62150e..e2a4219 100755 --- src/hg/htdocs/FAQ/FAQreleases.html +++ src/hg/htdocs/FAQ/FAQreleases.html @@ -404,31 +404,33 @@ http://genome.ucsc.edu/h/GCF_001984765.1</a> with the <b>GCF</b> accession. These assembly hubs are automatically updated, but not reviewed by UCSC. The species tree shows all genomes reviewed by UCSC.</p> <p> If the assembly of interest is not found, you may write in to our mailing list (<a href="mailto:genome@soe.ucsc.edu">genome@soe.ucsc.edu</a>) including the <a target="_blank" href="https://www.ncbi.nlm.nih.gov/assembly">NCBI Genbank assembly accession</a> for the requested assembly in the message. These will start with either <b>GCA_</b> or <b>GCF_</b>. Our agreement with the genomics community is that we wait until the assembly has been deposited into Genbank at NCBI before we process it. See the <a target="_blank" href="https://www.ncbi.nlm.nih.gov/assembly/docs/submission/"> -Assembly Submission Guidelines page</a> at NCBI for directions on their submission process.</p> +Assembly Submission Guidelines page</a> at NCBI for directions on their submission process. +Also, review the <a target="_blank" href="https://bit.ly/UCSC_blog_GenArk"</a>UCSC GenArk Blog posts</a> +for examples of accessing, using reviewing technical details about GenArk hubs.</p> <p> Another option available to all users is to create an <a href="/goldenPath/help/hgTrackHubHelp.html#Assembly"> assembly hub</a>. These are assemblies created and hosted by users and displayed on the Genome Browser. This requires no intervention by the UCSC Genome Browser and can be done for any assembly. See our <a href="/goldenPath/help/hubQuickStartAssembly.html"> Quick Start Guide to Assembly Hubs page</a> for additional information and resources. If you create an assembly hub, consider sharing it with others as a <a href="/cgi-bin/hgHubConnect">Public Hub</a>.</p> <a name="release12"></a> <h2>Differences between UCSC and NCBI mouse assemblies</h2> <h6>Is the mouse genome assembly displayed in the UCSC Genome Browser the same as the one on the NCBI website?</h6>