b4bf54cd20fd2d7cf9cd4cc0850e5bd0da714456 max Mon Jan 3 07:34:55 2022 -0800 making sure that success in GBIC does not return non-zero error code, refs #28585 diff --git src/product/installer/browserSetup.sh src/product/installer/browserSetup.sh index d546dc4..4890c66 100755 --- src/product/installer/browserSetup.sh +++ src/product/installer/browserSetup.sh @@ -1472,30 +1472,31 @@ touch $COMPLETEFLAG echo2 Install complete. You should now be able to point your web browser to this machine echo2 and test your UCSC Genome Browser mirror. It will be too slow for practical use. echo2 echo2 Notice that this mirror is still configured to use Mysql and data files loaded echo2 through the internet from UCSC. From most locations on the world, this is very slow. echo2 It also requires an open outgoing TCP port 3306 for Mysql to genome-mysql.soe.ucsc.edu/genome-euro-mysql.soe.ucsc.edu, echo2 and open TCP port 80 to hgdownload.soe.ucsc.edu/hgdownload-euro.soe.ucsc.edu. echo2 echo2 To finish the installation, you need to download genome data to the local echo2 disk. To download a genome assembly and all its files now, call this script again with echo2 the parameters 'download "<assemblyName1> <assemblyName2> ..."', e.g. '"'bash $0 mirror mm10 hg19'"' echo2 showMyAddress + exit 0 } # GENOME DOWNLOAD: mysql and /gbdb function downloadGenomes { DBS=$* GENBANKTBLS="" if [ "$DBS" == "" ] ; then echo2 Argument error: the '"download"' command requires at least one assembly name, like hg19 or mm10. exit 100 fi echo2 echo2 Downloading databases $DBS plus hgFixed/proteome/go from the UCSC download server echo2