38b9ede07fb3bfb98c74f611c62146b820747e4a braney Sat Dec 11 08:32:34 2021 -0800 check in custom hgc code for support of TOGA gene annotation from Michael Hiller's group diff --git src/hg/hgc/hgc.c src/hg/hgc/hgc.c index 3c5011c..326999a 100644 --- src/hg/hgc/hgc.c +++ src/hg/hgc/hgc.c @@ -26144,30 +26144,34 @@ else if (sameWord(table, "mrna") || sameWord(table, "mrna2") || startsWith("all_mrna",table) || sameWord(table, "all_est") || sameWord(table, "celeraMrna") || sameWord(table, "est") || sameWord(table, "intronEst") || sameWord(table, "xenoMrna") || sameWord(table, "xenoBestMrna") || startsWith("mrnaBlastz",table ) || startsWith("mrnaBad",table ) || sameWord(table, "xenoBlastzMrna") || sameWord(table, "sim4") || sameWord(table, "xenoEst") || sameWord(table, "psu") || sameWord(table, "tightMrna") || sameWord(table, "tightEst") || sameWord(table, "blatzHg17KG") || sameWord(table, "mapHg17KG") ) { doHgRna(tdb, item); } +else if (startsWith("HLTOGAannot", table)) + { + doHillerLabTOGAGene(tdb, item, table); + } else if (startsWith("pseudoMrna",table ) || startsWith("pseudoGeneLink",table ) || sameWord("pseudoUcsc",table)) { doPseudoPsl(tdb, item); } else if (startsWith("retroMrna",table ) || startsWith("retroAugust",table )|| startsWith("retroCds",table )|| startsWith("ucscRetro",table )) { retroClickHandler(tdb, item); } else if (sameString(table, "hgcRetroCdnaAli")) retroShowCdnaAli(item); else if (sameWord(table, "affyU95") || sameWord(table, "affyU133") || sameWord(table, "affyU74") || sameWord(table, "affyRAE230")