143a56b0b44cf95b2168da9782b1517b3b6fd8db dschmelt Tue Dec 7 12:23:07 2021 -0800 Updating makeDocs for jaspar 2022 update refs #28322 diff --git src/hg/makeDb/doc/mm10.txt src/hg/makeDb/doc/mm10.txt index 2766c32..e9b0586 100644 --- src/hg/makeDb/doc/mm10.txt +++ src/hg/makeDb/doc/mm10.txt @@ -18450,17 +18450,25 @@ vi mouse/jaspar.ra curl http://expdata.cmmt.ubc.ca/JASPAR/UCSC_tracks/mm10/trackDb.txt >> mouse/jaspar.ra cd /hive/data/genomes/mm10/bed mkdir jaspar cd jaspar wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2022/JASPAR2022_mm10.bb wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2020/JASPAR2020_mm10.bb mv JASPAR2022_mm10.bb JASPAR2022.bb mv JASPAR2020_mm10.bb JASPAR2020.bb cd /gbdb/mm10 mkdir jaspar cd jaspar ln -s /hive/data/genomes/mm10/bed/jaspar/JASPAR2022.bb . ln -s /hive/data/genomes/mm10/bed/jaspar/JASPAR2020.bb . +############################################################################### +# JASPAR$ 2022 bigBed update 12/7/21 +cd /hive/data/genomes/mm10/bed/jaspar +wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2020/JASPAR2020_mm10.bb +rm JASPAR2022.bb +mv JASPAR2022_mm10.bb JASPAR2022.bb +ls -lh +ls -lh /gbdb/mm10/jaspar