f44d5b894cf549947ac06bf2203670b6c56b3c31 max Fri Dec 17 09:21:39 2021 -0800 adding exome probesets, refs #28655 diff --git src/hg/makeDb/doc/hg19.txt src/hg/makeDb/doc/hg19.txt index cd08b38..8969a91 100644 --- src/hg/makeDb/doc/hg19.txt +++ src/hg/makeDb/doc/hg19.txt @@ -34052,30 +34052,34 @@ # Twist Biosciences Datasets: Track: Twist - RefSeq Exome Panel Target Regions Download: https://www.twistbioscience.com/sites/default/files/resources/2019-09/Twist_Exome_RefSeq_targets_hg19_0.bed File name: Twist_Exome_RefSeq_targets_hg19_0.bed Track: Twist - Core Exome Panel Target Regions Download: https://www.twistbioscience.com/sites/default/files/resources/2018-09/Twist_Exome_Target_hg19.bed File name: Twist_Exome_Target_hg19.bed Track: Twist - Comprehensive Exome Panel Target Regions Download: https://www.twistbioscience.com/sites/default/files/resources/2020-09/Twist_ComprehensiveExome_targets_hg19.bed File name: Twist_ComprehensiveExome_targets_hg19.bed +Track: Twist - Exome 2.1 +Download: curl https://www.twistbioscience.com/sites/default/files/resources/2021-10/hg38_Twist_exome_2_1_annotated_targets.bed | cut -f1-3 > TwistExome21.bed +bedToBigBed TwistExome21.bed ../../chrom.sizes TwistExome21.bb -type=bed3 + # MGI Datasets: Track: MGI - Easy Exome Capture V4 Target Regions Download: https://en.mgitech.cn/Uploads/Temp/file/20191225/5e03126e808a0.zip File name: MGI_Exome_Capture_V4.bed Track: MGI - Easy Exome Capture V5 Target Regions Download: https://en.mgitech.cn/Uploads/Temp/file/20191225/5e0312a7be43e.zip File name: MGI_Exome_Capture_V5.bed # Agilent Datasets: Download for all Agilent files: https://earray.chem.agilent.com/suredesign/ - Password needed (from Ana) Track: Agilent - SureSelect Clinical Research Exome Covered by Probes File name: S06588914_Covered.bed