0564395ec363631f2ff8d295da6f6b50f873fda4 braney Mon Jan 24 17:01:53 2022 -0800 more chromAlias work: some name changes and support for the new genark chromAlias format diff --git src/hg/hgTracks/chainTrack.c src/hg/hgTracks/chainTrack.c index 2fd8875..dd4049b 100644 --- src/hg/hgTracks/chainTrack.c +++ src/hg/hgTracks/chainTrack.c @@ -154,31 +154,31 @@ void *closure; struct sqlClosure sqlClosure; struct bbClosure bbClosure; linkRetrieveFunc queryFunc; if (tg->isBigBed) { closure = &bbClosure; queryFunc = doBbQuery; char *fileName = trackDbSetting(tg->tdb, "linkDataUrl"); if (fileName == NULL) { warn("Cannot find linkDataUrl in custom track \"%s\"\n", tg->shortLabel); return; } - struct bbiFile *bbi = bigBedFileOpenAlias(fileName, chromAliasGetHash(database)); + struct bbiFile *bbi = bigBedFileOpenAlias(fileName, chromAliasChromToAliasHash(database)); if (bbi == NULL) return; bbClosure.bbi = bbi; } else { closure = &sqlClosure; queryFunc = doQuery; sqlClosure.conn = hAllocConn(database); } lm = lmInit(1024*4); hash = newHash(0); /* Make up a hash of all linked features keyed by