2968c22e9a0e002863a920d5a60ad93df5cb48a7
gperez2
Tue Jan 18 18:22:28 2022 -0800
Updating the hgPcr example video link, refs #28779
diff --git src/hg/hgPcr/hgPcr.c src/hg/hgPcr/hgPcr.c
index cfc3927..799cfeb 100644
--- src/hg/hgPcr/hgPcr.c
+++ src/hg/hgPcr/hgPcr.c
@@ -203,31 +203,31 @@
dyStringFree(&dy);
sqlFreeResult(&sr);
hDisconnectCentral(&conn);
hFreeConn(&conn2);
slReverse(&serverList);
return serverList;
}
void doHelp()
/* Print up help page */
{
puts(
"In-Silico PCR searches a sequence database with a pair of\n"
"PCR primers, using an indexing strategy for fast performance.\n"
"See an example\n"
-"video\n"
"on our YouTube channel.\n"
"\n"
"
Configuration Options
\n"
"Genome and Assembly - The sequence database to search.
\n"
"Target - If available, choose to query transcribed sequences.
\n"
"Forward Primer - Must be at least 15 bases in length.
\n"
"Reverse Primer - On the opposite strand from the forward primer. Minimum length of 15 bases.
\n"
"Max Product Size - Maximum size of amplified region.
\n"
"Min Perfect Match - Number of bases that match exactly on 3' end of primers. Minimum match size is 15.
\n"
"Min Good Match - Number of bases on 3' end of primers where at least 2 out of 3 bases match.
\n"
"Flip Reverse Primer - Invert the sequence order of the reverse primer and complement it.
\n"
"\n"
"Output
\n"
"When successful, the search returns a sequence output file in fasta format \n"