c014326efaedb835a44760dbe4e2ed4c8e992412 braney Thu Feb 10 14:13:21 2022 -0800 add some tests to subColumn diff --git src/utils/subColumn/tests/input/ensembl.tab src/utils/subColumn/tests/input/ensembl.tab new file mode 100644 index 0000000..402b9fa --- /dev/null +++ src/utils/subColumn/tests/input/ensembl.tab @@ -0,0 +1,194 @@ +chr1 1 +chr10 10 +chr11 11 +chr11_KI270721v1_random KI270721.1 +chr12 12 +chr13 13 +chr14 14 +chr14_GL000009v2_random GL000009.2 +chr14_GL000194v1_random GL000194.1 +chr14_GL000225v1_random GL000225.1 +chr14_KI270722v1_random KI270722.1 +chr14_KI270723v1_random KI270723.1 +chr14_KI270724v1_random KI270724.1 +chr14_KI270725v1_random KI270725.1 +chr14_KI270726v1_random KI270726.1 +chr15 15 +chr15_KI270727v1_random KI270727.1 +chr16 16 +chr16_KI270728v1_random KI270728.1 +chr17 17 +chr17_GL000205v2_random GL000205.2 +chr17_KI270729v1_random KI270729.1 +chr17_KI270730v1_random KI270730.1 +chr18 18 +chr19 19 +chr1_KI270706v1_random KI270706.1 +chr1_KI270707v1_random KI270707.1 +chr1_KI270708v1_random KI270708.1 +chr1_KI270709v1_random KI270709.1 +chr1_KI270710v1_random KI270710.1 +chr1_KI270711v1_random KI270711.1 +chr1_KI270712v1_random KI270712.1 +chr1_KI270713v1_random KI270713.1 +chr1_KI270714v1_random KI270714.1 +chr2 2 +chr20 20 +chr21 21 +chr22 22 +chr22_KI270731v1_random KI270731.1 +chr22_KI270732v1_random KI270732.1 +chr22_KI270733v1_random KI270733.1 +chr22_KI270734v1_random KI270734.1 +chr22_KI270735v1_random KI270735.1 +chr22_KI270736v1_random KI270736.1 +chr22_KI270737v1_random KI270737.1 +chr22_KI270738v1_random KI270738.1 +chr22_KI270739v1_random KI270739.1 +chr2_KI270715v1_random KI270715.1 +chr2_KI270716v1_random KI270716.1 +chr3 3 +chr3_GL000221v1_random GL000221.1 +chr4 4 +chr4_GL000008v2_random GL000008.2 +chr5 5 +chr5_GL000208v1_random GL000208.1 +chr6 6 +chr7 7 +chr8 8 +chr9 9 +chr9_KI270717v1_random KI270717.1 +chr9_KI270718v1_random KI270718.1 +chr9_KI270719v1_random KI270719.1 +chr9_KI270720v1_random KI270720.1 +chrM MT +chrUn_GL000195v1 GL000195.1 +chrUn_GL000213v1 GL000213.1 +chrUn_GL000214v1 GL000214.1 +chrUn_GL000216v2 GL000216.2 +chrUn_GL000218v1 GL000218.1 +chrUn_GL000219v1 GL000219.1 +chrUn_GL000220v1 GL000220.1 +chrUn_GL000224v1 GL000224.1 +chrUn_GL000226v1 GL000226.1 +chrUn_KI270302v1 KI270302.1 +chrUn_KI270303v1 KI270303.1 +chrUn_KI270304v1 KI270304.1 +chrUn_KI270305v1 KI270305.1 +chrUn_KI270310v1 KI270310.1 +chrUn_KI270311v1 KI270311.1 +chrUn_KI270312v1 KI270312.1 +chrUn_KI270315v1 KI270315.1 +chrUn_KI270316v1 KI270316.1 +chrUn_KI270317v1 KI270317.1 +chrUn_KI270320v1 KI270320.1 +chrUn_KI270322v1 KI270322.1 +chrUn_KI270329v1 KI270329.1 +chrUn_KI270330v1 KI270330.1 +chrUn_KI270333v1 KI270333.1 +chrUn_KI270334v1 KI270334.1 +chrUn_KI270335v1 KI270335.1 +chrUn_KI270336v1 KI270336.1 +chrUn_KI270337v1 KI270337.1 +chrUn_KI270338v1 KI270338.1 +chrUn_KI270340v1 KI270340.1 +chrUn_KI270362v1 KI270362.1 +chrUn_KI270363v1 KI270363.1 +chrUn_KI270364v1 KI270364.1 +chrUn_KI270366v1 KI270366.1 +chrUn_KI270371v1 KI270371.1 +chrUn_KI270372v1 KI270372.1 +chrUn_KI270373v1 KI270373.1 +chrUn_KI270374v1 KI270374.1 +chrUn_KI270375v1 KI270375.1 +chrUn_KI270376v1 KI270376.1 +chrUn_KI270378v1 KI270378.1 +chrUn_KI270379v1 KI270379.1 +chrUn_KI270381v1 KI270381.1 +chrUn_KI270382v1 KI270382.1 +chrUn_KI270383v1 KI270383.1 +chrUn_KI270384v1 KI270384.1 +chrUn_KI270385v1 KI270385.1 +chrUn_KI270386v1 KI270386.1 +chrUn_KI270387v1 KI270387.1 +chrUn_KI270388v1 KI270388.1 +chrUn_KI270389v1 KI270389.1 +chrUn_KI270390v1 KI270390.1 +chrUn_KI270391v1 KI270391.1 +chrUn_KI270392v1 KI270392.1 +chrUn_KI270393v1 KI270393.1 +chrUn_KI270394v1 KI270394.1 +chrUn_KI270395v1 KI270395.1 +chrUn_KI270396v1 KI270396.1 +chrUn_KI270411v1 KI270411.1 +chrUn_KI270412v1 KI270412.1 +chrUn_KI270414v1 KI270414.1 +chrUn_KI270417v1 KI270417.1 +chrUn_KI270418v1 KI270418.1 +chrUn_KI270419v1 KI270419.1 +chrUn_KI270420v1 KI270420.1 +chrUn_KI270422v1 KI270422.1 +chrUn_KI270423v1 KI270423.1 +chrUn_KI270424v1 KI270424.1 +chrUn_KI270425v1 KI270425.1 +chrUn_KI270429v1 KI270429.1 +chrUn_KI270435v1 KI270435.1 +chrUn_KI270438v1 KI270438.1 +chrUn_KI270442v1 KI270442.1 +chrUn_KI270448v1 KI270448.1 +chrUn_KI270465v1 KI270465.1 +chrUn_KI270466v1 KI270466.1 +chrUn_KI270467v1 KI270467.1 +chrUn_KI270468v1 KI270468.1 +chrUn_KI270507v1 KI270507.1 +chrUn_KI270508v1 KI270508.1 +chrUn_KI270509v1 KI270509.1 +chrUn_KI270510v1 KI270510.1 +chrUn_KI270511v1 KI270511.1 +chrUn_KI270512v1 KI270512.1 +chrUn_KI270515v1 KI270515.1 +chrUn_KI270516v1 KI270516.1 +chrUn_KI270517v1 KI270517.1 +chrUn_KI270518v1 KI270518.1 +chrUn_KI270519v1 KI270519.1 +chrUn_KI270521v1 KI270521.1 +chrUn_KI270522v1 KI270522.1 +chrUn_KI270528v1 KI270528.1 +chrUn_KI270529v1 KI270529.1 +chrUn_KI270530v1 KI270530.1 +chrUn_KI270538v1 KI270538.1 +chrUn_KI270539v1 KI270539.1 +chrUn_KI270544v1 KI270544.1 +chrUn_KI270548v1 KI270548.1 +chrUn_KI270579v1 KI270579.1 +chrUn_KI270580v1 KI270580.1 +chrUn_KI270581v1 KI270581.1 +chrUn_KI270582v1 KI270582.1 +chrUn_KI270583v1 KI270583.1 +chrUn_KI270584v1 KI270584.1 +chrUn_KI270587v1 KI270587.1 +chrUn_KI270588v1 KI270588.1 +chrUn_KI270589v1 KI270589.1 +chrUn_KI270590v1 KI270590.1 +chrUn_KI270591v1 KI270591.1 +chrUn_KI270593v1 KI270593.1 +chrUn_KI270741v1 KI270741.1 +chrUn_KI270742v1 KI270742.1 +chrUn_KI270743v1 KI270743.1 +chrUn_KI270744v1 KI270744.1 +chrUn_KI270745v1 KI270745.1 +chrUn_KI270746v1 KI270746.1 +chrUn_KI270747v1 KI270747.1 +chrUn_KI270748v1 KI270748.1 +chrUn_KI270749v1 KI270749.1 +chrUn_KI270750v1 KI270750.1 +chrUn_KI270751v1 KI270751.1 +chrUn_KI270752v1 KI270752.1 +chrUn_KI270753v1 KI270753.1 +chrUn_KI270754v1 KI270754.1 +chrUn_KI270755v1 KI270755.1 +chrUn_KI270756v1 KI270756.1 +chrUn_KI270757v1 KI270757.1 +chrX X +chrY Y +chrY_KI270740v1_random KI270740.1