Commits for braney

v427_base to v428_preview (2022-02-21 to 2022-02-28) v428

b622d147b7dbac52dbf3ba26928cd18e02d42bd8 Sat Feb 26 12:34:37 2022 -0800

• add support for using a bigBed as the chromAlias file
  • src/hg/hgTables/bigBed.c - lines changed 7, context: html, text, full: html, text
  • src/hg/hgTables/bigWig.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgTables/hic.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgTracks/bigBedTrack.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTracks/bigWigTrack.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTracks/chainTrack.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.c - lines changed 33, context: html, text, full: html, text
  • src/hg/hgTracks/vcfTrack.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTracks/wigMafTrack.c - lines changed 3, context: html, text, full: html, text
  • src/hg/hgc/barChartClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/bigBedClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/bigDbSnpClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/bigRmskClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/clinvarSubLolly.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgc/encodeClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 6, context: html, text, full: html, text
  • src/hg/hgc/lrgClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/mafClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/togaClick.c - lines changed 3, context: html, text, full: html, text
  • src/hg/hgc/transMapClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/wiggleClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/inc/chromAlias.h - lines changed 18, context: html, text, full: html, text
  • src/hg/inc/trackHub.h - lines changed 5, context: html, text, full: html, text
  • src/hg/lib/chainNetDbLoad.c - lines changed 2, context: html, text, full: html, text
  • src/hg/lib/chromAlias.c - lines changed 248, context: html, text, full: html, text
  • src/hg/lib/customFactory.c - lines changed 4, context: html, text, full: html, text
  • src/hg/lib/hdb.c - lines changed 14, context: html, text, full: html, text
  • src/hg/lib/hgHgvs.c - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/hic.c - lines changed 13, context: html, text, full: html, text
  • src/hg/lib/trackHub.c - lines changed 8, context: html, text, full: html, text
  • src/inc/bbiFile.h - lines changed 4, context: html, text, full: html, text
  • src/inc/bigBed.h - lines changed 1, context: html, text, full: html, text
  • src/inc/bigWig.h - lines changed 2, context: html, text, full: html, text
  • src/lib/bbiRead.c - lines changed 8, context: html, text, full: html, text
  • src/lib/bigBed.c - lines changed 2, context: html, text, full: html, text
  • src/lib/bwgQuery.c - lines changed 2, context: html, text, full: html, text