1ff9db2c7a16fbc5f3ef80468cea9c0d93469b22 hiram Thu Feb 24 14:05:28 2022 -0800 add a column 1 tool tip to indicate request or browser refs #28930 diff --git src/hg/gar/garTable.sh src/hg/gar/garTable.sh index 94d8312..81b1a17 100755 --- src/hg/gar/garTable.sh +++ src/hg/gar/garTable.sh @@ -57,46 +57,49 @@

What is this page for?

This page lists both whole genome assembly browsers that are available for immediate viewing, and assemblies that are not currently available but can be requested.

We are working on adding a search function to this page. Until then, please use the "find" feature of your Browser (commonly CTRL+F).

After searching the page, if you do not find the assembly you are interested in, you may request it using the "Can't find your assembly?" button at the top of the page. Complete the request form (including the NCBI GenBank or RefSeq assembly accession identifier). You will be notified by email when your assembly is available for viewing in the UCSC Genome Browser. This can take up to three weeks. The assembly browser will include the following annotation tracks: Assembly mapping, Base position, -Gaps (when present), GC Percent, Restriction Enzymes, Tandem Duplications, +Gaps, GC Percent, Restriction Enzymes, Tandem Duplications, CpG Islands, RefSeq mRNAs, Repeat Masking, and, if available: NCBI RefSeq Genes and Ensembl Genes.

This page is optimized for use in Firefox and Safari

\n" cut -d' ' -f3,5 \ /cluster/home/hiram/kent/src/hg/makeDb/doc/asmHubs/master.run.list \ | sort | awk '{printf "%s\t%s\n", $1, $2};' > asmId.sciName sort -k1,1 -u \ /cluster/home/hiram/kent/src/hg/makeDb/doc/*AsmHub/*.orderList.tsv \ > asmId.commonName; sort -u /hive/data/outside/ncbi/genomes/reports/newAsm/*.suppressed.asmId.list \ > asmId.suppressed.list join -t$'\t' asmId.sciName asmId.commonName > asmId.sciName.commonName $srcDir/garTable.pl +# the column 1 tooltip display window, controlled in javaScript +printf "
request
\n" + # add in the modal popUp request hidden window printf " \n"