3ab681f0f137f69e14917a4cb67cf21dd923b2e3 hiram Fri Feb 25 11:01:53 2022 -0800 update a couple of identities to newer versions no redmine diff --git src/hg/utils/phyloTrees/220way.nh src/hg/utils/phyloTrees/220way.nh index ccfbd3b..43c0cdb 100644 --- src/hg/utils/phyloTrees/220way.nh +++ src/hg/utils/phyloTrees/220way.nh @@ -1,96 +1,96 @@ (((((((((((((((((((((hg38:0.00655, - panTro5:0.00684):0.00122, - panPan2:0.00784):0.003, - gorGor5:0.008964):0.009693, + panTro6:0.00684):0.00122, + panPan3:0.00784):0.003, + gorGor6:0.008964):0.009693, ponAbe2:0.01894):0.003471, nomLeu3:0.02227):0.01204, - (((((rheMac8:0.003991, + (((((rheMac10:0.003991, (macFas5:0.002991, macNem1:0.005):0.001):0.001, cerAty1:0.008):0.005, papAnu3:0.010042):0.01061, (chlSab2:0.027, manLeu1:0.03):0.002):0.003, ((nasLar1:0.0007, colAng1:0.0008):0.0008, (rhiRox1:0.0007, - rhiBie1:7.0E-4):8.0E-4):0.018):0.02):0.02183, - (((calJac3:0.03, + rhiBie1:0.0007):0.0008):0.018):0.02):0.02183, + (((calJac4:0.03, saiBol1:0.01035):0.00865, cebCap1:0.04):0.006, aotNan1:0.04):0.005):0.05209, tarSyr2:0.1114):0.02052, (((micMur3:0.0556, proCoq1:0.05):0.015, (eulMac1:0.01, eulFla1:0.01):0.015):0.015, otoGar3:0.1194):0.02052):0.013494, ((tupChi1:0.07, tupBel1:0.086203):0.05, galVar1:0.08):0.054937):0.002, ((((speTri2:0.075468, marMar1:0.07):0.05, ((casCan1:0.07, dipOrd2:0.071759):0.1, (jacJac1:0.1, ((perManBai1:0.08, (micOch1:0.08, (criGri1:0.04, mesAur1:0.04):0.04):0.03):0.06, - ((mm10:0.089509, + ((mm39:0.089509, rn6:0.096589):0.032773, nanGal1:0.06):0.04):0.03015):0.05):0.05):0.022992, ((hetGla2:0.05, fukDam1:0.05):0.05, ((cavPor3:0.035629, cavApe1:0.03):0.03, (chiLan1:0.06, octDeg1:0.1):0.06):0.05):0.06015):0.025746, (oryCun2:0.114227, ochPri3:0.201069):0.101463):0.015313):0.020593, (((susScr3:0.12, ((vicPac2:0.047275, (camFer1:0.01, (camBac1:0.01, camDro1:0.01):0.01):0.01):0.04, ((balAcu1:0.05, (lipVex1:0.04, (turTru2:0.034688, (orcOrc1:0.019688, phyCat1:0.015):0.02):0.01):0.01):0.01, - (((((bosTau8:0.015, + (((((bosTau9:0.015, bosInd1:0.015):0.01, bisBis1:0.01):0.005, bosMut1:0.03):0.02, bubBub1:0.05):0.06, - ((((oviAri3:0.02, + ((((oviAri4:0.02, oviMus1:0.02):0.01, capHir1:0.05):0.04, panHod1:0.08):0.005, odoTex1:0.005):0.01):0.013592):0.025153):0.020335):0.02, - (((((((equCab2:0.029397, + (((((((equCab3:0.029397, equPrz1:0.03):0.02, equAsi1:0.05):0.01, cerSim1:0.025):0.025, manPen1:0.05):0.007, manJav1:0.01):0.01, ((felCat8:0.058612, ((panTig1:0.025, panPar1:0.025):0.01, aciJub1:0.035):0.015):0.042, - ((canFam3:0.034458, + ((canFam4:0.034458, musFur1:0.03):0.02, ((ailMel1:0.01, ursMar1:0.01):0.01, (odoRosDiv1:0.02, (lepWed1:0.005, neoSch1:0.005):0.01):0.02):0.062):0.02):0.049845):0.006219, ((eidHel1:0.07, ((pteAle1:0.05, pteVam2:0.063399):0.02, rouAeg1:0.05):0.01):0.02, (rhiFer1:0.03, (ptePar1:0.03, (megLyr1:0.03, (hipArm1:0.02, (rhiSin1:0.02,