3ab681f0f137f69e14917a4cb67cf21dd923b2e3
hiram
  Fri Feb 25 11:01:53 2022 -0800
update a couple of identities to newer versions no redmine

diff --git src/hg/utils/phyloTrees/220way.nh src/hg/utils/phyloTrees/220way.nh
index ccfbd3b..43c0cdb 100644
--- src/hg/utils/phyloTrees/220way.nh
+++ src/hg/utils/phyloTrees/220way.nh
@@ -1,220 +1,220 @@
 (((((((((((((((((((((hg38:0.00655,
-                    panTro5:0.00684):0.00122,
-                   panPan2:0.00784):0.003,
-                  gorGor5:0.008964):0.009693,
+                    panTro6:0.00684):0.00122,
+                   panPan3:0.00784):0.003,
+                  gorGor6:0.008964):0.009693,
                  ponAbe2:0.01894):0.003471,
                 nomLeu3:0.02227):0.01204,
-               (((((rheMac8:0.003991,
+               (((((rheMac10:0.003991,
                    (macFas5:0.002991,
                    macNem1:0.005):0.001):0.001,
                   cerAty1:0.008):0.005,
                  papAnu3:0.010042):0.01061,
                 (chlSab2:0.027,
                 manLeu1:0.03):0.002):0.003,
                ((nasLar1:0.0007,
                 colAng1:0.0008):0.0008,
                (rhiRox1:0.0007,
-               rhiBie1:7.0E-4):8.0E-4):0.018):0.02):0.02183,
-              (((calJac3:0.03,
+               rhiBie1:0.0007):0.0008):0.018):0.02):0.02183,
+              (((calJac4:0.03,
                 saiBol1:0.01035):0.00865,
                cebCap1:0.04):0.006,
               aotNan1:0.04):0.005):0.05209,
              tarSyr2:0.1114):0.02052,
             (((micMur3:0.0556,
               proCoq1:0.05):0.015,
              (eulMac1:0.01,
              eulFla1:0.01):0.015):0.015,
             otoGar3:0.1194):0.02052):0.013494,
            ((tupChi1:0.07,
             tupBel1:0.086203):0.05,
            galVar1:0.08):0.054937):0.002,
           ((((speTri2:0.075468,
              marMar1:0.07):0.05,
             ((casCan1:0.07,
              dipOrd2:0.071759):0.1,
             (jacJac1:0.1,
             ((perManBai1:0.08,
              (micOch1:0.08,
              (criGri1:0.04,
              mesAur1:0.04):0.04):0.03):0.06,
-            ((mm10:0.089509,
+            ((mm39:0.089509,
              rn6:0.096589):0.032773,
             nanGal1:0.06):0.04):0.03015):0.05):0.05):0.022992,
            ((hetGla2:0.05,
             fukDam1:0.05):0.05,
            ((cavPor3:0.035629,
             cavApe1:0.03):0.03,
            (chiLan1:0.06,
            octDeg1:0.1):0.06):0.05):0.06015):0.025746,
           (oryCun2:0.114227,
           ochPri3:0.201069):0.101463):0.015313):0.020593,
          (((susScr3:0.12,
            ((vicPac2:0.047275,
             (camFer1:0.01,
             (camBac1:0.01,
             camDro1:0.01):0.01):0.01):0.04,
            ((balAcu1:0.05,
             (lipVex1:0.04,
             (turTru2:0.034688,
             (orcOrc1:0.019688,
             phyCat1:0.015):0.02):0.01):0.01):0.01,
-           (((((bosTau8:0.015,
+           (((((bosTau9:0.015,
                bosInd1:0.015):0.01,
               bisBis1:0.01):0.005,
              bosMut1:0.03):0.02,
             bubBub1:0.05):0.06,
-           ((((oviAri3:0.02,
+           ((((oviAri4:0.02,
               oviMus1:0.02):0.01,
              capHir1:0.05):0.04,
             panHod1:0.08):0.005,
            odoTex1:0.005):0.01):0.013592):0.025153):0.020335):0.02,
-          (((((((equCab2:0.029397,
+          (((((((equCab3:0.029397,
                 equPrz1:0.03):0.02,
                equAsi1:0.05):0.01,
               cerSim1:0.025):0.025,
              manPen1:0.05):0.007,
             manJav1:0.01):0.01,
            ((felCat8:0.058612,
             ((panTig1:0.025,
              panPar1:0.025):0.01,
             aciJub1:0.035):0.015):0.042,
-           ((canFam3:0.034458,
+           ((canFam4:0.034458,
             musFur1:0.03):0.02,
            ((ailMel1:0.01,
             ursMar1:0.01):0.01,
            (odoRosDiv1:0.02,
            (lepWed1:0.005,
            neoSch1:0.005):0.01):0.02):0.062):0.02):0.049845):0.006219,
           ((eidHel1:0.07,
            ((pteAle1:0.05,
             pteVam2:0.063399):0.02,
            rouAeg1:0.05):0.01):0.02,
           (rhiFer1:0.03,
           (ptePar1:0.03,
           (megLyr1:0.03,
           (hipArm1:0.02,
           (rhiSin1:0.02,
           (minNat1:0.02,
           (eptFus1:0.02,
           (myoDav1:0.04,
           (myoBra1:0.02,
           myoLuc2:0.02254):0.02):0.05):0.0025):0.0025):0.0025):0.0025):0.01):0.01):0.03):0.035706):0.002508):0.011671,
          (eriEur2:0.221785,
          (sorAra2:0.169562,
          conCri1:0.1):0.1):0.056393):0.021227):0.023664,
         ((((((loxAfr3:0.002242,
              eleEdw1:0.05):0.02,
             proCap2:0.145358):0.02699,
            triMan1:0.1):0.049697,
           (chrAsi1:0.03,
           echTel2:0.235936):0.01):0.03,
          oryAfe1:0.03):0.02,
         (dasNov3:0.116664,
         choHof1:0.096357):0.053145):0.006717):0.234728,
        (((monDom5:0.055686,
          phaCin1:0.05):0.01,
         sarHar1:0.005):0.005,
        macEug2:0.122008):0.2151):0.071664,
       ornAna2:0.456592):0.109504,
      ((((((((colLiv1:0.1,
             ((lepDis1:0.1,
              merNub1:0.1):0.02,
             ((pelCri1:0.1,
              (phaCar1:0.1,
              phaLep1:0.1):0.01):0.01,
             ((pteGut1:0.1,
              (nipNip1:0.1,
              egrGar1:0.1):0.01):0.01,
             ((pygAde1:0.1,
              aptFor1:0.1):0.02,
             (((((carCri1:0.1,
                 mesUni1:0.1):0.02,
                eurHel1:0.1):0.02,
               balPav1:0.1):0.02,
              chlUnd1:0.1):0.02,
             (((falChe1:0.1,
               falPer1:0.1):0.01,
              (aquChr2:0.1,
              (halAlb1:0.05,
              halLeu1:0.05):0.05):0.01):0.02,
             (((manVit2:0.08,
               ((corBra1:0.035,
                corCor1:0.035):0.035,
               (acaChl1:0.06,
               (ficAlb2:0.04,
               (((serCan1:0.024,
                 zonAlb1:0.024457):0.01,
                geoFor1:0.041261):0.015,
               taeGut2:0.06):0.01):0.01):0.02):0.01):0.012066,
              pseHum1:0.06):0.025,
             (gavSte1:0.04,
             (capCar1:0.04,
             (melUnd1:0.046985,
             (amaVit1:0.026,
             araMac1:0.026):0.01):0.01):0.01):0.02):0.064703):0.01):0.01):0.01):0.01):0.01):0.01):0.05,
            (phoRub1:0.1,
            (opiHoa1:0.1,
            (tauEry1:0.1,
            (fulGla1:0.1,
            (chaVoc2:0.1,
            (cucCan1:0.1,
            (calAnn1:0.1,
            (apaVit1:0.1,
            (anaPla1:0.1,
            (bucRhi1:0.1,
            (tytAlb1:0.1,
            ((galGal6:0.0312537,
             cotJap2:0.035):0.01,
            melGal5:0.085718):0.011045):0.01):0.01):0.01):0.01):0.01):0.01):0.01):0.01):0.01):0.01):0.01):0.02,
           colStr1:0.2):0.02,
          picPub1:0.2):0.02,
         (strCam1:0.02,
         tinGut2:0.02):0.02):0.16,
        ((allMis1:0.1,
         allSin1:0.1):0.05,
        (croPor2:0.05,
        gavGan1:0.05):0.05):0.1):0.045143,
       ((cheMyd1:0.1,
        chrPic2:0.1):0.05,
       (pelSin1:0.1,
       apaSpi1:0.1):0.05):0.04):0.01,
      (((((pytBiv1:0.1,
          (thaSir1:0.1,
          proMuc1:0.1):0.1):0.05,
         vipBer1:0.15):0.05,
        anoCar2:0.247):0.1,
       gekJap1:0.3):0.1,
      ambMex1:0.4):0.05):0.072):0.05,
     ((xenTro9:0.177944,
      xenLae2:0.2):0.1,
     nanPar1:0.2):0.07):0.1,
    latCha1:0.977944):0.111354,
   (((((((((stePar1:0.09,
           ((dicLab1:0.08,
            (tetNig2:0.124159,
            (fr3:0.103847,
            takFla1:0.1):0.1):0.05):0.04759,
           (oreNil3:0.1,
           (cynSem1:0.05,
           (neoBri1:0.05,
           (hapBur1:0.05,
           (mayZeb1:0.05,
           punNye1:0.05):0.05):0.05):0.05):0.05):0.1):0.04):0.05759,
          (oryLat2:0.38197,
          (cypVar1:0.3,
          (xipMac1:0.2,
          (poeFor1:0.1,
          poeRet1:0.1):0.1):0.1):0.1):0.1):0.015,
         gasAcu1:0.246413):0.015,
        notCor1:0.35):0.01,
       (sebNig1:0.2,
       sebRub1:0.2):0.2):0.02,
      gadMor1:0.25):0.1,
     esoLuc1:0.35):0.12564,
    (angJap1:0.45,
    (danRer11:0.430752,
    astMex1:0.4):0.1):0.2):0.143632,
   lepOcu1:0.4):0.326688):0.1,
  calMil1:0.75):0.1,
 (petMar3:0.4,
 letCam1:0.4):0.575747);