Commits for hiram

v428_preview to v428_preview2 (2022-02-28 to 2022-03-07) v428

e27fd8c7e843c93ef395c2065f0c72530a13dbba Mon Feb 28 12:11:00 2022 -0800

• adding a rat assembly GCA_021556685.1_UTH_Rnor_SHRSP_BbbUtx_1.0 per user request refs #28841
  • src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv - lines changed 1, context: html, text, full: html, text

be6de36d134aa80ccf9c34cf4d14a2adf36f1e24 Wed Mar 2 16:32:11 2022 -0800

• link the constructed indexes in an assembly hub build into the public crispor data directory for other parts of the procedure no redmine
  • src/hg/utils/automation/doCrispr.pl - lines changed 2, context: html, text, full: html, text

da977cb10ba717d64216de2cbeeb9948c9c78714 Wed Mar 2 16:33:41 2022 -0800

• adding crisprAll as an asmHub track no redmine
  • src/hg/utils/automation/asmHubCrisprAll.pl - lines changed 278, context: html, text, full: html, text
  • src/hg/utils/automation/asmHubTrackDb.sh - lines changed 35, context: html, text, full: html, text
  • src/hg/utils/automation/asmHubXenoRefGene.pl - lines changed 7, context: html, text, full: html, text