42ccdd815277a3dc7d78b48fa0ac36d469ab628a markd Mon Feb 28 19:07:04 2022 -0800 added bigRmsk autoSql files from Robert Hubley diff --git src/hg/lib/bigRmskBed.as src/hg/lib/bigRmskBed.as new file mode 100644 index 0000000..a00dcd0 --- /dev/null +++ src/hg/lib/bigRmskBed.as @@ -0,0 +1,18 @@ +table bigRmskBed +"Repetitive Element Annotation" +( +string chrom; "Reference sequence chromosome or scaffold" +uint chromStart; "Start position of visualization on chromosome" +uint chromEnd; "End position of visualation on chromosome" +string name; "Name repeat, including the type/subtype suffix" +uint score; "Divergence score" +char[1] strand; "+ or - for strand" +uint thickStart; "Start position of aligned sequence on chromosome" +uint thickEnd; "End position of aligned sequence on chromosome" +uint reserved; "Reserved" +uint blockCount; "Count of sequence blocks" +lstring blockSizes; "A comma-separated list of the block sizes(+/-)" +lstring blockStarts; "A comma-separated list of the block starts(+/-)" +uint id; "A unique identifier for the joined annotations in this record" +lstring description; "A comma separated list of technical annotation descriptions" +)