cc2335c2d1f3f50ff9e1deb19172c2695db65339 hiram Thu Mar 24 13:52:45 2022 -0700 correctly link to chromAlias.txt instead of chromAlias.bb to display in the chromInfo page as a link to view refs #27228 diff --git src/hg/hgTracks/hgTracks.c src/hg/hgTracks/hgTracks.c index 8256556..6da421a 100644 --- src/hg/hgTracks/hgTracks.c +++ src/hg/hgTracks/hgTracks.c @@ -10419,40 +10419,45 @@ { cgiSimpleTableRowStart(); cgiSimpleTableFieldStart(); puts("Download as file:"); cgiTableFieldEnd(); cgiSimpleTableFieldStart(); if (chromSizesFile) { printf("%s.chrom.sizes.txt", chromSizesFile, trackHubSkipHubName(database)); puts("  "); } else puts(" "); cgiTableFieldEnd(); cgiSimpleTableFieldStart(); - printf("%s.chromAlias.txt", hubAliasFile, trackHubSkipHubName(database)); + char *aliasUrl = cloneString(hubAliasFile); + /* this URL reference needs to be a text file to work as a click in the + * html page. Both files chromAlias.bb and chromAlias.txt exist. + */ + if (endsWith(hubAliasFile, "chromAlias.bb")) + aliasUrl = replaceChars(hubAliasFile, "chromAlias.bb", "chromAlias.txt"); + printf("%s.chromAlias.txt", aliasUrl, trackHubSkipHubName(database)); cgiTableFieldEnd(); cgiTableRowEnd(); } } void chromInfoPage() /* Show list of chromosomes (or scaffolds, etc) on which this db is based. */ { -fprintf(stderr, "# DBG chromInfoPage entered\n"); boolean hasAlias = FALSE; char *chromSizesFile = NULL; char *aliasFile = NULL; if (trackHubDatabase(database)) { /* either one of these files present will work */ aliasFile = trackHubAliasFile(database); if (aliasFile) { hasAlias = TRUE; } else { aliasFile = trackHubAliasBbFile(database); if (aliasFile) hasAlias = TRUE; } chromSizesFile = trackHubChromSizes(database);