4d295f9eff3c03708dfbac9b85e144b9cbf2d291 kuhn Mon Mar 21 10:38:39 2022 -0700 make clear its a different type of class than EVA class diff --git src/hg/lib/evaSnp.as src/hg/lib/evaSnp.as index 8d1adb4..c7c0987 100644 --- src/hg/lib/evaSnp.as +++ src/hg/lib/evaSnp.as @@ -2,18 +2,18 @@ "Variant data from EVA VCF files" ( string chrom; "Reference sequence chromosome or scaffold" uint chromStart; "Start position in chrom" uint chromEnd; "End position in chrom" string name; "Reference SNP identifier" uint score; "Not used" char[1] strand; "Which DNA strand contains the observed alleles" uint thickStart; "Same as chromStart" uint thickEnd; "Same as chromEnd" uint itemRgb; "RGB value for color of item" lstring ref; "The sequence of the reference allele" lstring alt; "The sequences of the alternate alleles" string varClass; "The variant class (VC) from EVA Sequence Ontology term" lstring submitters; "Submitter ID (SID) reporting a variant" - string ucscClass; "Class of variant per UCSC Variant Annotation Integrator" + string ucscClass; "Functional class per UCSC Variant Annotation Integrator" string aaChange; "Change in amino acid" )