8cbdb800a1d6e5a699372b44567f77ef6ff4cc37 hiram Thu Apr 21 12:21:36 2022 -0700 adding NCBI RefSeq genes refs #29278 diff --git src/hg/makeDb/doc/chm13v2.0/makefile src/hg/makeDb/doc/chm13v2.0/makefile index 43e20b9..7f880ae 100644 --- src/hg/makeDb/doc/chm13v2.0/makefile +++ src/hg/makeDb/doc/chm13v2.0/makefile @@ -3,30 +3,31 @@ asmId = ${accession}_T2T-CHM13v2.0 stageDir = /hive/data/genomes/asmHubs/genbankBuild/GCA/009/914/755/${asmId} pushFromDir = /hive/data/genomes/asmHubs//GCA/009/914/755/${accession} pushToDir = /mirrordata/hubs/GCA/009/914/755/${accession} # default set of hub track html description files htmlFiles = html/GCA_009914755.4_T2T-CHM13v2.0.assembly.html \ html/GCA_009914755.4_T2T-CHM13v2.0.chainNet.html \ html/GCA_009914755.4_T2T-CHM13v2.0.cpgIslands.html \ html/GCA_009914755.4_T2T-CHM13v2.0.description.html \ html/GCA_009914755.4_T2T-CHM13v2.0.gc5Base.html \ html/GCA_009914755.4_T2T-CHM13v2.0.repeatMasker.html \ html/GCA_009914755.4_T2T-CHM13v2.0.simpleRepeat.html \ html/GCA_009914755.4_T2T-CHM13v2.0.windowMasker.html \ +html/GCA_009914755.4_T2T-CHM13v2.0.refSeqComposite.html \ html/GCA_009914755.4_T2T-CHM13v2.0.xenoRefGene.html # tracks not used notPushed = html/GCA_009914755.4_T2T-CHM13v2.0.augustus.html \ html/GCA_009914755.4_T2T-CHM13v2.0.tanDups.html # files used to construct a useOneFile hub.txt hubTxt = hub/GCA_009914755.4_T2T-CHM13v2.0.hub.txt \ hub/GCA_009914755.4_T2T-CHM13v2.0.genomes.txt \ trackDb/GCA_009914755.4_T2T-CHM13v2.0.trackDb.txt alpha:: singleFileHub @printf "# setting up hub files for hgdownload-test staging\n" make stageFiles