8fdef9e866ecc228bfe4ea54102d0079818f0366 braney Fri Apr 8 14:49:38 2022 -0700 let bedGraphToBigWig use chromAlias.bb as chromSizes file. Add tests to both bedGraphToBigWig and bedToBigBed diff --git src/utils/bedGraphToBigWig/tests/input/test1.bed src/utils/bedGraphToBigWig/tests/input/test1.bed new file mode 100644 index 0000000..dd685b0 --- /dev/null +++ src/utils/bedGraphToBigWig/tests/input/test1.bed @@ -0,0 +1,38735 @@ +CM000663.2 14403 29570 2 +CM000663.2 30365 30503 5 +CM000663.2 34553 36081 6 +CM000663.2 52472 53312 7 +CM000663.2 62947 63887 8 +CM000663.2 69090 70008 9 +CM000663.2 89294 120932 10 +CM000663.2 131024 134836 12 +CM000663.2 135140 135895 13 +CM000663.2 137681 137965 14 +CM000663.2 139789 140339 15 +CM000663.2 141473 149707 16 +CM000663.2 157783 157887 18 +CM000663.2 160445 161525 19 +CM000663.2 187890 187958 20 +CM000663.2 200879 201017 21 +CM000663.2 258567 259024 22 +CM000663.2 266360 297502 23 +CM000663.2 347981 348366 24 +CM000663.2 358856 365704 26 +CM000663.2 439869 440232 27 +CM000663.2 450739 451678 28 +CM000663.2 485031 485211 29 +CM000663.2 487100 489906 30 +CM000663.2 491224 493241 31 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