e31cf0a8c121c0d36707912926d4d6f6f80b3708
hiram
  Fri Jun 3 12:05:39 2022 -0700
now using chromAlias.bb, better mkSymlink progress, no more restriction on dynamicBlat server space and report total track count on verify

diff --git src/hg/makeDb/doc/asmHubs/sendToHgdownload.sh src/hg/makeDb/doc/asmHubs/sendToHgdownload.sh
index 916ad7f..c4b2fca 100755
--- src/hg/makeDb/doc/asmHubs/sendToHgdownload.sh
+++ src/hg/makeDb/doc/asmHubs/sendToHgdownload.sh
@@ -19,52 +19,50 @@
 
 if [ "${badLinks}" -gt 0 ]; then
   printf "ERROR: missing symlink targets:\n" 1>&2
   find "/hive/data/genomes/asmHubs/${dirPath}" -type l -lname \* \
     | xargs --no-run-if-empty ls -lL > /dev/null
   exit 255
 fi
 
 export destDir="/mirrordata/hubs/${dirPath}"
 printf "# srcDir: %s\n" "${srcDir}"
 printf "# destDir: %s\n" "${destDir}"
 
 ssh qateam@hgdownload.soe.ucsc.edu "mkdir -p ${destDir}" 2>&1 | grep -v "X11 forwarding request" || true
 printf "# successful mkdir on hgdownload\n"
 
-### 2021-12-20 - out of disk space on dynablat
+### 2021-12-20 - out of disk space on dynablat-01
+### 2022-06-01 new dynamic-01 machine more disk space
 
-if [ 1 -eq 0 ]; then
+export dynaBlat="dynablat-01.soe.ucsc.edu"
+
+# export dynaBlat="128.114.119.136"
 
 ### check if there are actually index files to go:
 
 export idxCount=`ls ${srcDir}/*.gfidx 2> /dev/null | wc -l`
 
 if [ "${idxCount}" -gt 0 ]; then
 
 export dynaServerDir="/scratch/hubs/${dirPath}"
 
-ssh qateam@dynablat-01.soe.ucsc.edu "mkdir -p ${dynaServerDir}" 2>&1 | grep -v "X11 forwarding request" || true
-printf "# successful mkdir on dynablat-01\n"
+ssh qateam@$dynaBlat "mkdir -p ${dynaServerDir}" 2>&1 | grep -v "X11 forwarding request" || true
+printf "# successful mkdir on $dynaBlat\n"
 
-rsync --stats -a -L -P ${srcDir}/*.2bit "qateam@dynablat-01.soe.ucsc.edu:${dynaServerDir}/" \
+rsync --stats -a -L -P ${srcDir}/*.2bit "qateam@$dynaBlat:${dynaServerDir}/" \
   2>&1 | grep -v "X11 forwarding request" || true
-rsync --stats -a -L -P ${srcDir}/*.gfidx "qateam@dynablat-01.soe.ucsc.edu:${dynaServerDir}/" \
+rsync --stats -a -L -P ${srcDir}/*.gfidx "qateam@$dynaBlat:${dynaServerDir}/" \
   2>&1 | grep -v "X11 forwarding request" || true
 
 fi
 
-fi
-
-### 2021-12-20 - out of disk space on dynablat
-##################################################################
-
 # the new single file hub genome trackDb file:
 # genomes.txt obsolete now with the single file
 # ssh qateam@hgdownload.soe.ucsc.edu "rm ${destDir}/genomes.txt" 2>&1 | egrep -v "cannot remove|X11 forwarding request" || true
 # ssh qateam@hgdownload.soe.ucsc.edu "rm ${destDir}/html/*.description.html" 2>&1 | grep -v "X11 forwarding request" || true
 rsync --delete --exclude="hub.txt" --exclude="download.hub.txt" --stats -a -L -P "${srcDir}/" "qateam@hgdownload.soe.ucsc.edu:${destDir}/" \
   2>&1 | grep -v "X11 forwarding request" || true
 # the new single file hub genome trackDb file:
 rsync --stats -a -L -P "${srcDir}/download.hub.txt" "qateam@hgdownload.soe.ucsc.edu:${destDir}/hub.txt" \
   2>&1 | grep -v "X11 forwarding request" || true
 printf "# successful rsync\n"