9a7166e85eed31008c9235b2d219c5705f6613f6
max
  Mon May 23 08:16:52 2022 -0700
adding revel subtrack for locations where the scores differ, refs #29475

diff --git src/hg/makeDb/trackDb/human/revel.ra src/hg/makeDb/trackDb/human/revel.ra
index 53a485f..d90155e 100644
--- src/hg/makeDb/trackDb/human/revel.ra
+++ src/hg/makeDb/trackDb/human/revel.ra
@@ -1,57 +1,77 @@
 track revel
 shortLabel REVEL Scores
 longLabel REVEL Pathegenicity Score for single-base coding mutations (zoom for exact score)
 type bigWig
 compositeTrack on
 visibility hide
-maxWindowToQuery 500000
 group phenDis
 color 150,80,200
-maxWindowToDraw 10000000
-mouseOverFunction noAverage
 dataVersion /gbdb/$D/revel/version.txt
 
         track revelA
         shortLabel Mutation: A
         longLabel Revel: Mutation is A
         type bigWig
         parent revel on
         visibility dense
         bigDataUrl /gbdb/$D/revel/a.bw
         maxHeightPixels 128:20:8
         viewLimits 0:1.0
         viewLimitsMax 0:1.0
+        maxWindowToDraw 10000000
+        maxWindowToQuery 500000
+        mouseOverFunction noAverage
 
         track revelC
         shortLabel Mutation: C
         longLabel Revel: Mutation is C
         type bigWig
         parent revel on
         visibility dense
         bigDataUrl /gbdb/$D/revel/c.bw
         maxHeightPixels 128:20:8
         viewLimits 0:1.0
         viewLimitsMax 0:1.0
+        maxWindowToDraw 10000000
+        maxWindowToQuery 500000
+        mouseOverFunction noAverage
 
         track revelG
         shortLabel Mutation: G
         longLabel Revel: Mutation is G
         type bigWig
         parent revel on
         visibility dense
         bigDataUrl /gbdb/$D/revel/g.bw
         maxHeightPixels 128:20:8
         viewLimits 0:1.0
         viewLimitsMax 0:1.0
+        maxWindowToDraw 10000000
+        maxWindowToQuery 500000
+        mouseOverFunction noAverage
 
         track revelT
         shortLabel Mutation: T
         longLabel Revel: Mutation is T
         type bigWig
         parent revel on
         visibility dense
         bigDataUrl /gbdb/$D/revel/t.bw
         maxHeightPixels 128:20:8
         viewLimits 0:1.0
         viewLimitsMax 0:1.0
+        maxWindowToDraw 10000000
+        maxWindowToQuery 500000
+        mouseOverFunction noAverage
+
+        track overlaps
+        shortLabel Overlaps
+        longLabel Revel: Positions with >2 scores due to overlapping transcripts
+        type bigBed 8 +
+        parent revel on
+        visibility dense
+        bigDataUrl /gbdb/$D/revel/overlap.bb
+        url https://www.ensembl.org/homo_sapiens/Transcript/Summary?t=$<transcriptId>&db=core
+        urlLabel Link to Ensembl Transcript View
+        mouseOver REVEL score=${revelScore} for transcripts: ${transcriptId}