6ecc9ffc2466edde7f943ad7456a969bde280127 brianlee Thu Jun 23 06:09:46 2022 -0700 Adding an image for Hi-C on the hic.html page after MLQ, refs #29620 diff --git src/hg/htdocs/goldenPath/help/hic.html src/hg/htdocs/goldenPath/help/hic.html index 98ac48e..95cf445 100755 --- src/hg/htdocs/goldenPath/help/hic.html +++ src/hg/htdocs/goldenPath/help/hic.html @@ -116,26 +116,31 @@ type hic visibility dense</code></pre> <p> <b>Note:</b> there is now a <code>useOneFile on</code> hub setting that allows the hub properties to be specified in a single file. More information about this setting can be found on the <a href="./hgTracksHelp.html#UseOneFile" target="_blank">Genome Browser User Guide</a>.</p> <p> Here is a direct link to the <em><a href="examples/hubDirectory/hg19/trackDb.txt" target="_blank">trackDb.txt</a></em> file to see more information about this example hub, and below is a direct link to visualize the hub in the browser, where this example hic file displays in dense mode alongside the other tracks in this hub. You can find more Track Hub hic display options on the <a href="trackDb/trackDbHub.html#hic" target="_blank">Track Database (trackDb) Definition Document</a> page.</p> <pre><code><a href="../../cgi-bin/hgTracks?db=hg19&hubUrl=http://genome.ucsc.edu/goldenPath/help/examples/hubDirectory/hub.txt" target="_blank">http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg19&hubUrl=http://genome.ucsc.edu/goldenPath/help/examples/hubDirectory/hub.txt</a> </code></pre> +<div class="text-center"> + <a href="../../cgi-bin/hgTracks?db=hg19&hubUrl=http://genome.ucsc.edu/goldenPath/help/examples/hubDirectory/hub.txt"> + <img src="../../images/hic_image" alt="Ex hic image from track hub" width="700"> + </a> +</div> <h2>Sharing Your Data with Others</h2> <p> If you would like to share your hic data track with a colleague, there are a couple of options. One method is to load your data track into the UCSC Genome Browser and then create a saved session by following the instructions <a href="https://hgwdev-jcasper.gi.ucsc.edu/goldenPath/help/hgSessionHelp.html#Create">here</a>. If you are looking for a more automated method of sharing data, you may be interested to learn how to create a direct URL that loads custom data files. For a demonstration of this, see <strong>Example 6</strong> on the <a href="customTrack.html#SHARE">custom tracks</a> page.</p> <!--#include virtual="$ROOT/inc/gbPageEnd.html" -->