Commits for braney

v433_preview to v433_preview2 (2022-06-13 to 2022-06-20) v433

9edd2ff80ac14453e69eed883fdd7e3118045dcb Tue Jun 14 12:16:46 2022 -0700

• spMrna mrnaID doesn't contain values from the all_mrna table
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text

96d2b3b695bde3e3f589069c0baf8e3023ff373f Tue Jun 14 12:19:09 2022 -0700

• add multiz100way sequence logo track
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 32, context: html, text, full: html, text

c774b06085131ad411971985c585fcd5753e8283 Wed Jun 15 11:05:38 2022 -0700

• move multiz100Logo to its own ra file
  • src/hg/makeDb/trackDb/human/hg38/multiz100Logo.ra - lines changed 48, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 47, context: html, text, full: html, text

9b26d149e1b358d2ad03390762261baeb2602a7d Wed Jun 15 12:25:10 2022 -0700

• add reverse complement support to sequence logo track
  • src/hg/hgTracks/wigTrack.c - lines changed 5, context: html, text, full: html, text

dcefe608401f82f186a40894c23e65f2d038fafe Thu Jun 16 15:45:39 2022 -0700

• switch to using danRer11 on mm39
  • src/hg/hgGene/hgGeneData/Mouse/mm39/otherOrgs.ra - lines changed 1, context: html, text, full: html, text

b187b81900601cb093a96e2159a30d8a94427de9 Thu Jun 16 16:15:39 2022 -0700

• tweaks to support sequence logo
  • src/hg/makeDb/trackDb/human/hg38/multiz100Logo.html - lines changed 11, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/multiz100Logo.ra - lines changed 5, context: html, text, full: html, text
  • src/hg/ratStuff/mafCounts/mafCounts.c - lines changed 73, context: html, text, full: html, text

363d60920206cd70ab8ec35a67a3e25c03eb8a46 Thu Jun 16 17:36:21 2022 -0700

• add 30way sequence logo on hg38
  • src/hg/makeDb/doc/hg38/multiz30way.txt - lines changed 35, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/multiz30Logo.html - lines changed 11, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/multiz30Logo.ra - lines changed 48, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 1, context: html, text, full: html, text

99ed5f3706d24ed4dea3994ef8b001c136605b7e Fri Jun 17 14:57:09 2022 -0700

• added knownGeneVM30.html
  • src/hg/makeDb/trackDb/mouse/mm39/knownGeneVM30.html - lines changed 142, context: html, text, full: html, text