af69ffbf81b490a42e1ac09e4c49e3043ef2c3c7
gperez2
  Wed Jul 13 19:44:06 2022 -0700
Updating script to silence NameError, no RM

diff --git src/utils/qa/imageComp.py src/utils/qa/imageComp.py
index 3ed682d..6b46a5b 100755
--- src/utils/qa/imageComp.py
+++ src/utils/qa/imageComp.py
@@ -82,31 +82,31 @@
         elif os.path.getsize(serverDir1+"/"+image) == 0:
             emptyFiles+=1
         else:    
             imagesCompared+=1
             previousImage = Image.open(serverDir1+"/"+image).convert('RGB')
             newImage = Image.open(serverDir2+"/"+image).convert('RGB')
             diff = ImageChops.difference(previousImage, newImage)
             if diff.getbbox():
                 differentImages+=1
                 diff.save(diffImagesDir+image)
                 diffImages.append(image)
             else:
                 noDiffImages.append(image)
     return(emptyFiles,imagesCompared,differentImages,diffImages,noDiffImages)
         
-def reportOutput(emptyFiles,imagesCompared,differentImages,diffImages,noDiffImages):
+def reportOutput(emptyFiles,imagesCompared,differentImages,diffImages,noDiffImages,diffImagesDir,publicHtmlDirToSave,publicHtmlDirToView,serverUrl1,sessionUser1,sessionName1,serverUrl2,sessionUser2,sessionName2):
     '''Report findings, if differences found create symlinks to public html'''
     if noDiffImages != []:
         print("No differences seen in the following session(s):")
         for image in noDiffImages:
             print(image)
     if diffImages != []:
         print("\nDifferences were observed in the following session(s):")
         for image in diffImages:
             print(image)
             run(["ln", "-sf", diffImagesDir+image, publicHtmlDirToSave+image])
             print("Link: "+publicHtmlDirToView+image)
             print("session 1: "+serverUrl1+"/cgi-bin/hgTracks?hgS_doOtherUser=submit&hgS_otherUserName="+sessionUser1+"&hgS_otherUserSessionName="+sessionName1)
             print("session 1: "+serverUrl2+"/cgi-bin/hgTracks?hgS_doOtherUser=submit&hgS_otherUserName="+sessionUser2+"&hgS_otherUserSessionName="+sessionName2)
     print("\nNumber of empty session files created: "+str(emptyFiles))
     print("Total number of images compared: "+str(imagesCompared))
@@ -130,18 +130,18 @@
     serverDir2 = "/hive/users/"+user+"/imageTest/cronImages/server2Images"
     diffImagesDir = "/hive/users/"+user+"/imageTest/cronImages/diffImages/"
     publicHtmlDirToSave = "/cluster/home/"+user+"/public_html/images/"
     publicHtmlDirToView = "https://hgwdev.gi.ucsc.edu/~"+user+"/images/"
     #Create first set of image file(s)
     populateServerDir1(sessionUser1,sessionName1,serverDir1,serverUrl1)
     #Create second set of image file(s)
     imageFiles = []
     imageFiles.append(createImageFromSession(sessionUser2,sessionName2,serverDir2,serverUrl2))
     #Compare images
     emptyFiles,imagesCompared,differentImages,diffImages,noDiffImages = imageCompare(imageFiles,serverDir2,serverDir1,diffImagesDir)
     #Report findings
     if diffImages == []: #Check if there is anything to report - that way cron does not output
         pass
     else:
-        reportOutput(emptyFiles,imagesCompared,differentImages,diffImages,noDiffImages)
+        reportOutput(emptyFiles,imagesCompared,differentImages,diffImages,noDiffImages,diffImagesDir,publicHtmlDirToSave,publicHtmlDirToView,serverUrl1,sessionUser1,sessionName1,serverUrl2,sessionUser2,sessionName2)
     
 main()