a15d57f02b4b49c9e3dbceaad6234e340ec96bbd
hiram
  Thu Jul 21 17:04:25 2022 -0700
improve the legacy index page with a GenArk clade indication refs #29545

diff --git src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt
new file mode 100644
index 0000000..71f4d0d
--- /dev/null
+++ src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt
@@ -0,0 +1,222 @@
+GCA_004365145.1_OryAfe_v1_BIUU	mammals
+GCF_001663975.1_Xenopus_laevis_v2	vertebrate
+GCA_011762505.1_mArvNil1.pat.X	mammals
+GCA_000001905.1_Loxafr3.0	mammals
+GCA_000767525.1_Vi_pacos_V1.0	mammals
+GCF_000164845.3_VicPac3.1	mammals
+GCA_004027675.1_CasCan_v1_BIUU	mammals
+GCA_000754665.1_Bison_UMD1.0	mammals
+GCA_000292845.1_OchPri3.0	mammals
+GCF_000764305.1_Hazt_2.0	invertebrates
+GCA_000464555.1_PanTig1.0	mammals
+GCA_003957555.2_bCalAnn1_v1.p	birds
+GCF_005281655.1_TAMU_Nfulva_1.0	invertebrates
+GCF_001594075.1_Tcor1.0	invertebrates
+GCA_000767585.1_PRJNA234474_Ca_dromedarius_V1.0	mammals
+GCA_004023825.1_VulLag_v1_BIUU	mammals
+GCA_001305755.1_ASM130575v1	mammals
+GCA_009819705.1_fHipHip1.pri	fish
+GCF_900700415.1_Ch_v2.0.2	fish
+GCA_905237065.2_Ssal_v3.1	fish
+GCF_000002995.3_ASM299v2	invertebrates
+GCA_000767855.1_Ca_bactrianus_MBC_1.0	mammals
+GCF_000687205.1_ASM68720v1	birds
+GCF_902150015.1_genome_assembly_l500	birds
+GCF_000511025.2_RefBeet-1.2.2	plants
+GCA_002288925.2_ASM228892v2	mammals
+GCF_016920785.1_Ixodes_scapularus_ComboLowHiFi	invertebrates
+GCF_001698545.1_ASM169854v1	primates
+GCA_001698545.1_ASM169854v1	primates
+GCA_009873245.2_mBalMus1.v2	mammals
+GCA_900634775.1_fGouWil2.1	fish
+GCF_000235385.1_SaiBol1.0	primates
+GCF_016699345.1_BCM_Sbol_2.0	primates
+GCA_905147365.1_ilAriAges1.1	invertebrates
+GCF_003584765.1_ASM358476v1	mammals
+GCA_012275295.1_bMelUnd1.mat.Z	birds
+GCA_905475465.1_ilPieNapi1.1	invertebrates
+GCA_905147795.1_ilPieRapa1.1	invertebrates
+GCA_004024565.1_ZalCal_v1_BIUU	mammals
+GCA_009762305.1_mZalCal1.pri	mammals
+GCF_007474595.1_mLynCan4_v1.p	mammals
+GCA_004027935.1_ChrAsi_v1_BIUU	mammals
+GCF_000691845.1_ASM69184v1	birds
+GCF_001659605.1_Manihot_esculenta_v6	plants
+GCA_000003205.6_Btau_5.0.1	mammals
+GCF_002263795.1_ARS-UCD1.2	mammals
+GCA_004024745.1_CatWag_v1_BIUU	mammals
+GCA_900634415.1_fCotGob3.1	fish
+GCF_001660625.1_IpCoco_1.2	fish
+GCA_001443585.1_aciJub1	mammals
+GCF_000747805.1_ChaPel_1.0	birds
+GCA_002880755.3_Clint_PTRv2	primates
+GCF_002994745.1_RchiOBHm-V2	plants
+GCF_003668045.1_CriGri-PICR	mammals
+GCA_000738955.1_M_pentadactyla-1.1.1	mammals
+GCF_000700745.1_ASM70074v1	birds
+GCF_900324465.1_fAnaTes1.1	fish
+GCA_900324465.2_fAnaTes1.2	fish
+GCA_905220415.1_ilColCroc2.1	invertebrates
+GCA_011762595.1_mTurTru1.mat.Y	mammals
+GCA_001922835.1_NIST_Tur_tru_v1	mammals
+GCA_011100635.1_mTriVul1.pri	mammals
+GCF_000951615.1_common_carp_genome	fish
+GCF_000709325.1_ASM70932v1	birds
+GCF_000365465.2_Ptep_2.0	invertebrates
+GCA_002940915.2_ASM294091v2	mammals
+GCA_000956105.1_Pcoq_1.0	primates
+GCF_004118075.1_ASM411807v1	plants
+GCA_000364345.1_Macaca_fascicularis_5.0	primates
+GCF_000364345.1_Macaca_fascicularis_5.0	primates
+GCA_000260255.1_OctDeg1.0	mammals
+GCA_004027395.1_CanFam_VD_v1_BIUU	mammals
+GCF_000215625.1_MusPutFur1.0	mammals
+GCA_000151735.1_Cavpor3.0	mammals
+GCA_014905235.2_Bmori_2016v1.0	invertebrates
+GCF_000699005.1_ASM69900v1	birds
+GCA_004024865.1_RouAeg_v1_BIUU	mammals
+GCF_000165045.1_Callorhinchus_milii-6.1.3	vertebrate
+GCF_002870075.2_Lsat_Salinas_v7	plants
+GCF_903992535.1_mArvAmp1.1	mammals
+GCA_901699155.1_bStrTur1.1	birds
+GCA_011064685.1_ZJU_Sfru_1.0	invertebrates
+GCF_011064685.1_ZJU_Sfru_1.0	invertebrates
+GCA_007364275.2_fArcCen1	fish
+GCA_000243295.1_TriManLat1.0	mammals
+GCF_016746245.1_Prin_Dsan_1.0	invertebrates
+GCF_004382195.1_ASM438219v1	invertebrates
+GCF_016746395.1_Prin_Dsim_3.0	invertebrates
+GCF_000005975.2_dyak_caf1	invertebrates
+GCF_016746365.1_Prin_Dyak_Tai18E2_2.0	invertebrates
+GCA_902459505.1_aGeoSer1.1	vertebrate
+GCF_000004335.2_AilMel_1.0	mammals
+GCA_002007445.1_ASM200744v1	mammals
+GCF_002007445.1_ASM200744v2	mammals
+GCA_905220565.1_ilMelCinx1.1	invertebrates
+GCA_001704415.1_ARS1	mammals
+GCF_900496995.1_bAquChr1.2	birds
+GCA_000349665.1_MesAur1.0	mammals
+GCA_000769185.1_Rrox_v1	primates
+GCA_000165445.3_Mmur_3.0	primates
+GCA_001890085.1_ASM189008v1	mammals
+GCA_004115265.2_mRhiFer1_v1.p	mammals
+GCA_004026985.1_MyoMyo_v1_BIUU	mammals
+GCA_901709675.1_fSynAcu1.1	fish
+GCF_000002595.1_v3.0	plants
+GCA_000409795.2_Chlorocebus_sabeus_1.1	primates
+GCF_000344595.1_CheMyd_1.0	vertebrate
+GCF_015237465.1_rCheMyd1.pri	vertebrate
+GCA_020740725.1_bCorHaw1.pri.cur	birds
+GCF_002201575.1_ASM220157v1	mammals
+GCA_002201575.1_ASM220157v1	mammals
+GCF_000738735.2_ASM73873v2	birds
+GCA_000002305.1_EquCab2.0	mammals
+GCF_000001635.26_GRCm38.p6	mammals
+GCF_002922805.1_Om_v0.7.RACA	fish
+GCA_004027435.1_ArtJam_v1_BIUU	mammals
+GCF_001577835.1_Coturnix_japonica_2.0	birds
+GCF_003227715.1_Hsal_v8.5	invertebrates
+GCF_004027225.1_bStrHab1_v1.p	birds
+GCA_004027225.2_bStrHab1.2.pri	birds
+GCA_905147105.1_ilPieBrab1.1	invertebrates
+GCF_009764565.2_rDerCor1.pri.v3	vertebrate
+GCA_009764565.1_rDerCor1.pri	vertebrate
+GCA_000280705.1_JacJac1.0	mammals
+GCF_017639655.1_bFalNau1.pat	birds
+GCF_002870075.1_Lsat_Salinas_v7	plants
+GCA_001857705.1_PanPar1.0	mammals
+GCA_009769545.1_fCycLum1.pri	fish
+GCA_000952055.2_Anan_2.0	primates
+GCA_001685135.1_ManJav1.0	mammals
+GCF_000231095.1_Oryza_brachyantha.v1.4b	plants
+GCF_001649575.1_ASM164957v1	fish
+GCA_905333055.1_ilManJurt1.1	invertebrates
+GCA_004023905.1_SurSur_v1_BIUU	mammals
+GCA_000493695.1_BalAcu1.0	mammals
+GCA_004026785.1_MerUng_v1_BIUU	mammals
+GCF_002706865.1_ASM270686v1	invertebrates
+GCA_009769625.1_bCygOlo1.pri	birds
+GCA_000247695.1_HetGla_female_1.0	mammals
+GCA_004026685.1_MonMon_M_v1_BIUU	mammals
+GCF_000004555.1_ASM455v1	invertebrates
+GCF_000471905.2_AMTR1.0	plants
+GCA_000208655.2_Dasnov3.0	mammals
+GCA_011004845.1_fEsoLuc1.pri	fish
+GCA_000146795.3_Nleu_3.0	primates
+GCA_015227675.2_mRatBN7.2	mammals
+GCF_000264685.3_Panu_3.0	primates
+GCA_000264685.2_Panu_3.0	primates
+GCA_905220365.1_ilVanCard2.1	invertebrates
+GCF_004126475.1_mPhyDis1_v1.p	mammals
+GCF_005508785.1_pea_aphid_22Mar2018_4r6ur	invertebrates
+GCF_000340665.1_C.cajan_V1.0	plants
+GCF_008315115.1_SLUC_FBN_1	fish
+GCA_002966995.1_ASM296699v1	mammals
+GCF_004115215.1_mOrnAna1.p.v1	mammals
+GCA_004115215.3_mOrnAna1.pri.v3	mammals
+GCA_000687225.1_UrsMar_1.0	mammals
+GCA_902500255.1_fThaAma1.1	fish
+GCA_004027515.1_AntAmePen_v1_BIUU	mammals
+GCA_000696695.1_Burgud	mammals
+GCA_003327715.1_PumCon1.0	mammals
+GCA_000258655.2_panpan1.1	primates
+GCA_000003625.1_OryCun2.0	mammals
+GCA_905147765.2_ilVanAtal1.2	invertebrates
+GCF_000709365.1_ASM70936v1	birds
+GCF_000690535.1_ASM69053v1	birds
+GCF_004153925.1_Obicornis_v3	invertebrates
+GCA_000772875.3_Mmul_8.0.1	primates
+GCF_000695815.1_ASM69581v1	birds
+GCA_004024665.1_LemCat_v1_BIUU	primates
+GCF_014905685.1_NemWhi1	fish
+GCA_900094665.2_CAROLI_EIJ_v1.1	mammals
+GCF_016086655.2_UVic_Lsal_1.1	invertebrates
+GCA_002288905.2_ASM228890v2	mammals
+GCF_900634795.2_fBetSpl5.2	fish
+GCF_009828535.1_HMol	primates
+GCA_000313985.1_EchTel2.0	mammals
+GCF_001687245.1_Rhagoletis_zephyria_1.0	invertebrates
+GCF_006149115.1_Oner_1.0	fish
+GCA_004026725.1_OnyTor_v1_BIUU	mammals
+GCA_004027855.1_ChoDid_v1_BIUU	mammals
+GCA_000283155.1_CerSimSim1.0	mammals
+GCF_000004515.5_Glycine_max_v2.1	plants
+GCA_905163445.1_ilParAegt1.1	invertebrates
+GCA_002880775.3_Susie_PABv2	primates
+GCF_009819885.1_bCatUst1.pri	birds
+GCF_000189315.1_Devil_ref_v7.0	mammals
+GCF_000236235.1_SpeTri2.0	mammals
+GCA_010909765.1_sAmbRad1.pri	vertebrate
+GCF_010909765.1_sAmbRad1.pri	vertebrate
+GCF_001891065.1_H_comes_QL1_v1	fish
+GCA_002776525.1_ASM277652v1	primates
+GCF_002776525.2_ASM277652v2	primates
+GCF_002776525.3_ASM277652v3	primates
+GCA_000622305.1_S.galili_v1.0	mammals
+GCF_001633185.1_ValleyOak3.0	plants
+GCA_000471725.1_UMD_CASPUR_WB_2.0	mammals
+GCA_000349705.1_LepWed1.0	mammals
+GCA_000296755.1_EriEur2.0	mammals
+GCA_900006655.3_Susie3	primates
+GCF_000241765.3_Chrysemys_picta_bellii-3.0.3	vertebrate
+GCF_000341935.1_Ccin1	invertebrates
+GCF_004664715.1_Pero_0.1	mammals
+GCF_016700215.1_bGalGal1.pat.whiteleghornlayer.GRCg7w	birds
+GCA_002102435.1_Ovir.te_1.0	mammals
+GCA_002754865.1_ASM275486v1	primates
+GCF_000004665.1_Callithrix_jacchus-3.2	primates
+GCA_009663435.1_Callithrix_jacchus_cj1700_1.0	primates
+GCA_000311805.2_CB1	mammals
+GCF_002162155.1_WEW_v2.0	plants
+GCF_003945595.1_ASM394559v1	birds
+GCA_901343595.1_MONAX5	mammals
+GCA_003031525.1_Neophocaena_asiaeorientalis_V1	mammals
+GCF_003031525.1_Neophocaena_asiaeorientalis_V1	mammals
+GCA_000442215.1_Lipotes_vexillifer_v1	mammals
+GCF_003676075.1_ASM367607v1	mammals
+GCF_003676075.2_GSC_YBM_2.0	mammals
+GCF_000699245.1_ASM69924v1	birds
+GCA_003957565.2_bTaeGut1_v1.p	birds
+GCF_003957565.1_bTaeGut1_v1.p	birds
+GCA_000247795.2_Bos_indicus_1.0	mammals
+GCF_900324485.1_fMasArm1.1	fish