Commits for markd

v434_base to v435_preview (2022-07-18 to 2022-07-25) v435

04b879361227c44e9602945464b83e5346b5dd4f Tue Jul 19 22:38:07 2022 -0700

• add option to output autoSql style header to bigBedNamedItems
  • src/inc/bigBedCmdSupport.h - lines changed 13, context: html, text, full: html, text
  • src/lib/bigBedCmdSupport.c - lines changed 24, context: html, text, full: html, text
  • src/lib/makefile - lines changed 1, context: html, text, full: html, text
  • src/utils/bigBedNamedItems/bigBedNamedItems.c - lines changed 8, context: html, text, full: html, text
  • src/utils/bigBedToBed/bigBedToBed.c - lines changed 19, context: html, text, full: html, text

976c0e681fc3571f3a449ee2f7cb78400f11ce3e Fri Jul 22 11:39:18 2022 -0700

• moved t2t-supplied tracks out of bbi
  • src/hg/makeDb/doc/chm13v2.0userData/build.txt - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/doc/hs1/t2t-supplied.txt - lines changed 18, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/catLiftOffGenesV1.trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/censat.trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/clinVar20220313.trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/cytoBandMapped.trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/dbSNP155.trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/encode.trackDb.ra - lines changed 190, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/gwasSNPs2022-03-08.trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/hgCactus.trackDb.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/hgLiftOver.trackDb.ra - lines changed 12, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/hgUnique.trackDb.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/microsatellites.trackDb.ra - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/proseq.trackDb.ra - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/rdnaModel.trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/rnaseq.trackDb.ra - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/sedefSegDups.trackDb.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/sgdpCopyNumber.trackDb.ra - lines changed 348, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/t2tRepeatMasker.trackDb.ra - lines changed 2, context: html, text, full: html, text