be3ecf652180e0b491d02e4dc4fd1a8309a829b6 angie Wed Jul 6 18:13:18 2022 -0700 Yikes, never added AY.5.7 (missing from Chris's spreadsheet but in pango-designation/lineages.csv since April 1; p-d#387). Also added B.1.1.28 since it wasn't annotated for some reason. diff --git src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv index b85c129..7086391 100644 --- src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv +++ src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv @@ -170,30 +170,31 @@ AY.46.3 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > C10977T > G14186T > C19637T > G28378T AY.46.4 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > C10977T > G23545T AY.46.5 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > C10977T > C15569T > T16242G AY.46.6 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > C10977T > C6310T AY.46.6.1 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > C10977T > C6310T > C8326T > G4975A > C25162T > C29409T > T6226C,C27297T,C27418T,A28973G AY.47 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > T11418C > C9891T > C11514T > C5184T > A5584G > C13019T > C22227T > G28326T > C12049N > G22427A AY.48 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466N > T26767C > G15451N > C5184T > C1267T > C1191T > A17496G > T9678C > G9203A,C11005A > A20396G > A21792C > G27948T AY.49 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C5184T > C1267T > C1191T > C9891T > T11418C > T12946C > A20262G > C27739T > C18176T > C26110T > T5773C,C10834T,C23039G,G24124T,A27979T AY.5 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > G24928T AY.5.1 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > G24928T > C29253T > C27143A AY.5.2 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > G24928T > C29253T > C25572T AY.5.3 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > G24928T > C29253T > C7488T AY.5.4 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > G24928T > C29253T > C1191T AY.5.5 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > G24928T > C29253T > C6840T AY.5.6 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > G24928T > C29253T > A14788G > C2455T,C10605T,G27327T +AY.5.7 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > G24928T > C29253T > C7945T > G11534A,A20418G > A23063T > C9532T > G1478T,G5164T,A13691C,G21255C AY.50 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C5184T > C1267T > C1191T > C9891T > T11418C > T12946C > A20262G > C27739T > C18176T > C5730T > C19554T,G22484C,G28809T AY.51 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C5184T > C1267T > C1191T > C9891T > T11418C > T12946C > A20262G > C27739T > C18176T > A25562G > G12223T,A25697T AY.52 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C5184T > C1267T > C1191T > C9891T > T11418C > T12946C > A20262G > C27739T > C18176T > T24984G > G26428T > T25689C AY.53 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C5184T > C1267T > C1191T > C9891T > T11418C > T12946C > A20262G > C27739T > C18176T > G21641T > G1738T,C18348T AY.54 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C5184T > C1267T > C1191T > C9891T > T11418C > T12946C > A20262G > C27739T > C18176T > C19160T > A25806G AY.55 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > T11418C > C9891T > C11514T > C5184T > A5584G > C13019T > C22227T > A10978G AY.56 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > T11418C > C9891T > C11514T > C5184T > A5584G > C13019T > C22227T > G27870T > C25624T AY.57 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > T11418C > C9891T > C11514T > C5184T > A5584N > C13019T > C22227T > C1403T AY.58 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > T11418C > C9891T > C11514T > C5184T > A5584G > C13019T > C22227T > C5192T AY.59 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > T11418C > C9891T > C11514T > C5184T > A5584G > C13019T > C22227T > C19164T > T20391G AY.6 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > G17331T AY.60 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > T11418C > C9891T > C11514T > C5184T > A5584G > C13019T > C22227T > G4162T > A2165C,G17122T > C2919T,T8634C AY.61 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > T11418C > C9891T > C11514T > C5184T > A5584G > C13019T > C22227T > T25532C AY.62 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > T11418C > C9891T > C11514T > C5184T > A5584G > C13019T > C22227T > G29440A > G1820A > A20085G > A1045T AY.63 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > T11418C > C9891T > C11514T > C5184T > A5584G > C13019T > C22227T > A7886G > A23848G > A14246G > C9857T > C8964T > A19126G,C25710T,G29616N @@ -247,30 +248,31 @@ AY.99.2 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461N > C16466T > T26767C > G15451A > C10029T > C19220T > G28916T > G4181T > C27874T > C7124T > G9053T > C8986T > A11332G > A11201G > C6402T > C15240T > T13216C > A3536G > C4927T,C12525T B.1.617.2 C14408T > C241N > C3037T > A23403G > G29742N > T22917G > T27638C > G28881T > G210N > C21618G > G29402T > C23604G > C25469T > C22995A,C27752T > A28461G B.1.351 C14408T > C241N > C3037T > A23403G > G25563T > C1059T > C23664T > A21801C > G5230T,C25904T,C26456T > G22813T > A10323G > C28887T > G174N > A23063T > G23012A B.1.351.2 C14408T > C241N > C3037T > A23403G > G25563T > C1059T > C23664T > A21801C > G5230T,C25904T,C26456T > G22813T > A10323G > C28887T > G174N > A23063T > G23012A > A22206G > A2692T > C21614T > A8052G,G10396T > C10632T B.1.351.3 C14408T > C241N > C3037T > A23403G > G25563T > C1059T > C23664T > A21801C > G5230T,C25904T,C26456T > G22813T > A10323G > C28887T > G174N > A23063T > G23012A > A22206G > A2692T > C21614T > A8052G,G10396T > A16687G > C6402T,T7624C B.1.351.5 C14408T > C241N > C3037T > A23403G > G25563T > C1059T > C23664T > A21801C > G5230T,C25904T,C26456T > G22813T > A10323G > C28887T > G174N > A23063T > G23012A > A22206G > A2692T > C21614T > C26645T > G1463T,C25844T > A29406T > C664T,C19019A > T11296N > G25660A B.1.1.7 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > T28282A > G28280C,A28281T > A23063T > C15279T > C28977T > A28111G > C913T > C5986T > C23709T > T6954C > C23604A > C23271A > G24914C > T24506G > T16176C > C27972T > C14676T Q.1 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > T28282A > G28280C,A28281T > A23063T > C15279T > C28977T > A28111G > C913T > C5986T > C23709T > T6954C > C23604A > C23271A > G24914C > T24506G > T16176C > C27972T > C14676T > C3267T > C5388A > G28048T > T11296N > G11291N > C14220T Q.2 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > T28282A > G28280C,A28281T > A23063T > C15279T > C28977T > A28111G > C913T > C5986T > C23709T > T6954C > C23604A > C23271A > G24914C > T24506G > T16176C > C27972T > C14676T > C3267T > C5388A > G28048T > T11296N > G21770A > A21766C > G11291N,C21767T > A21768C > G22468T > C6636T > C25626T > A1752G Q.3 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > T28282A > G28280C,A28281T > A23063T > C15279T > C28977T > A28111G > C913T > C5986T > C23709T > T6954C > C23604A > C23271A > G24914C > T24506G > T16176C > C27972T > C14676T > C3267T > C5388A > G28048T > A17615G > G26730C > G20962A Q.4 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > T28282A > G28280C,A28281T > A23063T > C15279T > C28977T > A28111G > C913T > C5986T > C23709T > T6954C > C23604N > C23271A > G24914C > T24506G > T16176C > C27972T > C14676T > C3267T > C5388A > G28048T > T11296N > A17615G > A12162G > A4964G Q.5 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > T28282A > G28280C,A28281T > A23063T > C15279T > C28977T > A28111G > C913T > C5986T > C23709T > T6954C > C23604A > C23271A > G24914C > T24506G > T16176C > C27972T > C14676T > C3267T > C5388A > G28048T > T11296N > C2453T > G21974C > T23031C > C15656T,C28677T,C29114A,G29266C Q.6 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > T28282A > G28280C,A28281T > A23063T > C15279T > C28977T > A28111G > C913T > C5986T > C23709T > T6954C > C23604A > C23271A > G24914C > T24506G > T16176C > C27972T > C14676T > C3267T > C5388A > G28048T > A28095T > T11296N > T15096C > C25096T > C19164T > C29171T Q.7 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > T28282A > G28280C,A28281T > A23063T > C15279T > C28977T > A28111G > C913T > C5986T > C23709T > T6954C > C23604A > C23271A > G24914C > T24506G > T16176C > C27972T > C14676T > C3267T > C5388A > G28048T > A28095T > G28884C > T15096C > C5944T > T18018C > A17337G > A7069C Q.8 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > T28282A > G28280C,A28281T > A23063T > C15279T > C28977T > A28111G > C913T > C5986T > C23709T > T6954C > C23604A > C23271A > G24914C > T24506G > T16176C > C27972T > C14676T > C3267T > C5388A > G28048T > A28095T > T11296N > T15096C > C25096T > C19164T > G11291N > T11288N > A25974C > C12525T > G29751N +B.1.1.28 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > G25088T P.1 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T P.1.1 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > G11291N > T13851C P.1.2 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > G25641T > C1912T > A2550G,C5724T,G25855T,C28789T P.1.3 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > C5526T > C27942T P.1.4 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > T23599G P.1.5 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > C3117T,A18945G > T23599A P.1.6 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > C15714T > C10615T > C23604A P.1.7 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > C23604A P.1.7.1 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > C23604A > T3049C,C10116T P.1.8 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > T592C > C9891T > A4040G > C26039T > A20055G,C22971A,G27915T > C23604G,G25266T P.1.9 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > T592C > C9891T > A4040G > C6040T > C18647T,G23587C P.1.10 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > C1427T P.1.10.1 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > C1427T > C13329T > G11291N,T11296N > C2841T > G4300T > C26873T P.1.10.2 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > C1427T > C13329T > C20178T > T4033C,C5850T,T29726N P.1.11 C14408T > C241N > C3037T > A23403G > G28881A > G28883C > G28882A > C23525T > G23012A > A6613G,G25088T > A22812C,A23063T,T26149C > G21974T,A28877T,G28878C > C28512G > C13860T,G17259T > C12778T > A5648C > C3828T,G28167A > C24642T > T733C,C2749T > A6319G > G22132T > C21614T > C21621A > C21638T > T11296N > G11291N > T11288N > C7945T > C23604G