6f40c544e077ac2a21a887075ed2b109e3a09746
gperez2
  Mon Aug 22 14:15:38 2022 -0700
Updating the dbSNP 155 priority and updating dbSNP 153 visibility, refs #27751

diff --git src/hg/makeDb/trackDb/human/trackDb.ra src/hg/makeDb/trackDb/human/trackDb.ra
index 76a836a..ccf995d 100644
--- src/hg/makeDb/trackDb/human/trackDb.ra
+++ src/hg/makeDb/trackDb/human/trackDb.ra
@@ -1625,35 +1625,35 @@
 #classFilterValues snv,mnv,ins,del,delins,identity
 #classFilterType multipleListOr
 #ucscNotesFilterValues |(nothing noted),classMismatch|Variant class/type is inconsistent with allele sizes,clinvar|Present in ClinVar,clusterError|Overlaps a variant with the same type/class and position,commonAll|MAF >= 1% in all projects that report frequencies,commonSome|MAF >= 1% in at least one project that reports frequencies,delMismatch|Deleted sequence mismatches genomic reference sequence,diffMajor|Different projects report different major alleles,multiMap|Variant is placed in more than one genomic position,overlapDiffClass|Variant overlaps other variant(s) of different type/class,overlapSameClass|Variant overlaps other variant(s) of same type/class but different position,refIsMinor|Genomic reference allele is minor allele in at least one project that reports frequencies,refIsRare|Genomic reference allele frequency is <1% in at least one project,refIsSingleton|Genomic reference frequency is 0 in all projects reporting frequencies,revStrand|Variant maps to opposite strand relative to dbSNP's preferred top-level placement
 #ucscNotesFilterType multipleListOr
 #maxFuncImpactFilterValues 0|(not annotated),0865|frameshift,1587|stop_gained,1574|splice_acceptor_variant,1575|splice_donor_variant,1821|inframe_insertion,1583|missense_variant,1590|terminator_codon_variant,1819|synonymous_variant,1580|coding_sequence_variant,1623|5_prime_UTR_variant,1624|3_prime_UTR_variant,1619|nc_transcript_variant,2153|genic_upstream_transcript_variant,1986|upstream_transcript_variant,2152|genic_downstream_transcript_variant,1987|downstream_transcript_variant,1627|intron_variant
 #maxFuncImpactFilterType multipleListOr
 #priority 6.8
 #release alpha
 
 track dbSnp153Composite
 compositeTrack on
 shortLabel dbSNP 153
 longLabel Short Genetic Variants from dbSNP release 153
 type bed 3
 group varRep
-visibility pack
+visibility hide
 url https://www.ncbi.nlm.nih.gov/snp/$$
 urlLabel dbSNP: 
 subGroup1 view Views variants=Variants errs=Mapping_Errors
-priority 0.8
+priority 1
 pennantIcon Note green ../goldenPath/newsarch.html "dbSNP 155 is now available, and dbSNP 153 will be nested into the dbSNP archive soon."
 
     track dbSnp153ViewVariants
     view variants
     parent dbSnp153Composite
     shortLabel Variants
     visibility dense
     type bigDbSnp
     detailsTabUrls _dataOffset=/gbdb/hgFixed/dbSnp/dbSnp153Details.tab.gz
     freqSourceOrder 1000Genomes,GnomAD_exomes,TOPMED,ExAC,PAGE_STUDY,GnomAD,GoESP,Estonian,ALSPAC,TWINSUK,NorthernSweden,Vietnamese
     classFilterValues snv,mnv,ins,del,delins,identity
     classFilterType multipleListOr
     showCfg on
     ucscNotesFilterValues \
         altIsAmbiguous|Alternate allele contains IUPAC ambiguous base(s),\