9223208a7550e787bf2e76a00aab5cf28f8e184d markd Thu Aug 25 13:32:05 2022 -0700 missed place bigRmskTrackDesc.html linked needed to be edited diff --git src/hg/htdocs/goldenPath/help/bigRmsk.html src/hg/htdocs/goldenPath/help/bigRmsk.html index 9c6c6c6..95cba41 100755 --- src/hg/htdocs/goldenPath/help/bigRmsk.html +++ src/hg/htdocs/goldenPath/help/bigRmsk.html @@ -129,32 +129,33 @@ <p> As with other bigBed-based tracks, bigRmsk tracks can be displayed as <a href="hgTracksHelp.html#CustomTracks">custom tracks</a>, included in <a href="hubQuickStart.html">track hubs</a>, or <a href="hubQuickStartAssembly.html">assembly hubs</a>. </p> <p> The following options are used for bigRmsk custom tracks or trackDb entries: <ul> <li> <code>type bigRmsk</code> <li> <code>bigDataUrl<em><url></em></code> - URL or relative path of bigRmsk file <li> <code>xrefDataUrl<em><url></em></code> - URL or relative path of optional bigRmskAlign file </ul> - A standard bigRmsk track description is viable at <a href="/bigRmskTrackDesc.html">/bigRmskTrackDesc.html</a>, - which can be directly to with as the file URL <em>/bigRmskTrackDesc.html</em>. + A standard bigRmsk track description is available at <a href="/bigRmskTrackDesc.html">bigRmskTrackDesc.html</a>, + which can be directly to with as the URL:<br> + <em>http://genome.ucsc.edu/bigRmskTrackDesc.html</em>. <p> See the <a href="#examples">Examples</a> section below for detailed examples of bigRmsk custom tracks and track hub definitions. </p> <h2 id="examples">Examples</h2> <h3 id="example1">Example of a bigRmsk custom track</h3> <p> Construct a <a href="hgTracksHelp.html#CustomTracks">custom track</a> using a single <a href="hgTracksHelp.html#TRACK">track line</a>. Note that any of the track attributes listed <a href="customTrack.html#TRACK">here</a> are applicable to tracks of type bigBed. <p> To create a custom track using the example bigRmsk file: