f78618cf8dbb9de16915ae7f9ba56a46f58143cc braney Tue Aug 9 13:34:36 2022 -0700 support bigRmsk custom tracks diff --git src/hg/hgc/hgc.c src/hg/hgc/hgc.c index 4523893..460d4ad 100644 --- src/hg/hgc/hgc.c +++ src/hg/hgc/hgc.c @@ -22027,30 +22027,32 @@ doEncodePeak(ct->tdb, ct, fileName); else if (sameWord(type, "bigNarrowPeak")) doBigEncodePeak(ct->tdb, NULL, item); else if (sameWord(type, "bigWig")) bigWigCustomClick(ct->tdb); else if (sameWord(type, "bigChain")) genericChainClick(NULL, ct->tdb, item, start, "seq"); else if (sameWord(type, "bigPsl")) genericBigPslClick(NULL, ct->tdb, item, start, end); else if (sameWord(type, "bigMaf")) genericMafClick(NULL, ct->tdb, item, start); else if (sameWord(type, "bigDbSnp")) doBigDbSnp(ct->tdb, item); else if (sameWord(type, "bigBed") || sameWord(type, "bigGenePred") || sameWord(type, "bigLolly")) bigBedCustomClick(ct->tdb); +else if (startsWith("bigRmsk", type)) + doBigRmskRepeat(ct->tdb, item); else if (sameWord(type, "bigBarChart") || sameWord(type, "barChart")) doBarChartDetails(ct->tdb, item); else if (sameWord(type, "bigInteract") || sameWord(type, "interact")) doInteractDetails(ct->tdb, item); else if (sameWord(type, "bam")) doBamDetails(ct->tdb, itemName); else if (sameWord(type, "vcfTabix") || sameWord(type, "vcfPhasedTrio")) doVcfTabixDetails(ct->tdb, itemName); else if (sameWord(type, "vcf")) doVcfDetails(ct->tdb, itemName); else if (sameWord(type, "makeItems")) doMakeItemsDetails(ct, fileName); // fileName is first word, which is, go figure, id else if (ct->wiggle) { if (ct->dbTrack)