674141354338dfe084c2120ba9cdd69fdae35621 lrnassar Tue Oct 4 16:02:03 2022 -0700 Adding two missing URL parameters, refs #30077 diff --git src/hg/htdocs/goldenPath/help/customTrackText.html src/hg/htdocs/goldenPath/help/customTrackText.html index 386e581..5efba19 100755 --- src/hg/htdocs/goldenPath/help/customTrackText.html +++ src/hg/htdocs/goldenPath/help/customTrackText.html @@ -753,58 +753,64 @@ becomes "%23" and "|" becomes "%7"C. - example link to highlight two parts of the ABO locus in red and blue.
  • ignoreCookie=1 - do not load the user's existing settings saved in the internet browser's UCSC Genome Browser cookie. This means that the link will show the Genome Browser default settings such as track selections, custom tracks, and track hubs. Any changes you make in this new session will, however, affect the user's settings. E.g., if you add a track in this new window, and come back to the genome browser later, the track will still be there. This setting is useful if a website wants to link to the Genome Browser, starting with a "clean slate" but believes the user will come back to the Genome Browser expecting the changes to still be there.
  • - +
  • + ruler=hide - hide the ruler at the top of the browser image - + example link to hide the ruler
  • oligoMatch=pack&hgt.oligoMatch=<dnaSeq> - switch on the Short Match track and highlight a matching sequence - example link to highlight the TATAWAR motif in the ABO locus
  • pix=<number> - set the width of the image in pixels - example link to create a 300-pixel wide image
  • textSize=<number> - set the size of text font - example link to increase the text font size to 12 pixels
  • -
  • <trackName>=full|pack|dense|hide - show your current tracks, adding a track and set it to full, pack or dense visibility or hide it, respectively - example link to show the Chromosome Bands track set to "pack" and added to your view as saved in your cart. Please note that for this feature to work with custom tracks you must use the unique name and identifier number ct_name_#### assigned by our system. You can determine the name for a custom track using the url, https://genome.ucsc.edu/cgi-bin/cartDump. - - +
  • + <trackName>_imgOrd=<number> - vertically orders the tracks on the image + based on the numbers provided. You need to specify an order for every visible track when using this + parameter - + example link to show two show knownGene track being listed second with gtex first
  • <trackName>.heightPer=<number> - sets the height of the a bigWig track in pixels - example link to set umap bigWig track height to 100 pixels
  • <trackName>_hideKids=1 - hides a specific super track's individual tracks - example link to hide the Encode Regulation super track
  • <trackName>_sel=1 - selects specific subtrack to be 'checked', allowing display - example link to select the checkbox for UCSC RefSeq subtrack in the refSeq composite track, allowing display alongside default tracks