a529cabbe6ecc9e1dc9a9321bdfdcc6db1d10318
hiram
  Sat Sep 24 15:18:10 2022 -0700
default vis pack for TOGA track refs #29982

diff --git src/hg/utils/automation/asmHubTrackDb.sh src/hg/utils/automation/asmHubTrackDb.sh
index 97db060..a313a6c 100755
--- src/hg/utils/automation/asmHubTrackDb.sh
+++ src/hg/utils/automation/asmHubTrackDb.sh
@@ -874,44 +874,44 @@
   rm -f $buildDir/ixIxx/HLTOGAannotVs*.*
   tData=`ls -d $buildDir/trackData/TOGAv* | sed -e 's#.*/trackData#trackData#;'`
   fBase=`ls $buildDir/trackData/TOGAv*/HLTOGAannotVs*.bb | sed -e 's#.*/##; s/.bb//;'`
   # there is a bug in the source files that have galGal6 when they should
   # be GalGal6
   FBase=`echo $fBase | sed -e 's#galGal6#GalGal6#;'`
   ln -s ../$tData/$fBase.bb $buildDir/bbi/$FBase.bb
   ln -s ../$tData/$fBase.ix $buildDir/ixIxx/$FBase.ix
   ln -s ../$tData/$fBase.ixx $buildDir/ixIxx/$FBase.ixx
   if [ -d ${buildDir}/trackData/TOGAvHg38v1 ]; then
 printf "track HLTOGAannotvHg38v1
 bigDataUrl bbi/HLTOGAannotVsHg38v1.bb
 shortLabel TOGA vs. hg38
 longLabel TOGA annotations using human/hg38 as reference
 group genes
-visibility hide
+visibility pack
 itemRgb on
 type bigBed 12
 searchIndex name
 searchTrix  ixIxx/HLTOGAannotVsHg38v1.ix
 html html/TOGAannotation
 "
   elif [ -d ${buildDir}/trackData/TOGAvGalGal6v1 ]; then
 printf "track HLTOGAannotvGalGal6v1
 bigDataUrl bbi/HLTOGAannotVsGalGal6v1.bb
 shortLabel TOGA vs. galGal6
 longLabel TOGA annotations using chicken/galGal6 as reference
 group genes
-visibility hide
+visibility pack
 itemRgb on
 type bigBed 12
 searchIndex name
 searchTrix  ixIxx/HLTOGAannotVsGalGal6v1.ix
 html html/TOGAannotation
 "
   else
     printf "# ERROR: do not recognize TOGA build directory:\n" 1>&2
     ls -d ${buildDir}/trackData/TOGAv* 1>&2
     exit 255
   fi
 
 $scriptDir/asmHubTOGA.pl $asmId $buildDir/html/$asmId.names.tab $buildDir/trackData > $buildDir/html/TOGAannotation.html
 
 fi	#	if [ "${tg}" -gt 0 ]