b0b850bdc2557fed7f69594bc8fe013d478dbe85
hiram
  Wed Sep 28 10:19:12 2022 -0700
fixups for hs1 to database assemblies refs #29819

diff --git src/hg/utils/automation/doRecipBest.pl src/hg/utils/automation/doRecipBest.pl
index 4126d3f..8ca354c 100755
--- src/hg/utils/automation/doRecipBest.pl
+++ src/hg/utils/automation/doRecipBest.pl
@@ -483,30 +483,36 @@
 $dbExists = 0;
 $dbExists = 1 if (&HgAutomate::databaseExists($dbHost, $tDb));
 # db might exist, but it may not have chromInfo table (promoted hub)
 $tChromInfoExists = 0;
 if ($dbExists) {
   $tChromInfoExists = 1 if (&HgAutomate::dbTableExists($dbHost, $tDb, "chromInfo"));
 }
 # may be working with a query that has no database
 $qDbExists = 0;
 $qDbExists = 1 if (&HgAutomate::databaseExists($dbHost, $qDb));
 $qChromInfoExists = 0;
 if ($qDbExists) {
   $qChromInfoExists = 1 if (&HgAutomate::dbTableExists($dbHost, $qDb, "chromInfo"));
 }
 
+printf STDERR "# target db exists: %s\n", $dbExists ? "TRUE" : "FALSE";
+printf STDERR "# target chromInfo exists: %s\n", $tChromInfoExists ? "TRUE" : "FALSE";
+printf STDERR "# query db exists: %s\n", $qDbExists ? "TRUE" : "FALSE";
+printf STDERR "# query chromInfo exists: %s\n", $qChromInfoExists ? "TRUE" : "FALSE";
+printf STDERR "# trackHub: %s\n", $opt_trackHub ? "TRUE" : "FALSE";
+
 $QDb = ucfirst($qDb);
 
 $target2Bit = "$HgAutomate::clusterData/$tDb/$tDb.2bit";
 $query2Bit = "$HgAutomate::clusterData/$qDb/$qDb.2bit";
 $target2Bit = $opt_target2Bit if ($opt_target2Bit);
 $query2Bit = $opt_query2Bit if ($opt_query2Bit);
 $targetSizes = "$HgAutomate::clusterData/$tDb/chrom.sizes";
 $querySizes = "$HgAutomate::clusterData/$qDb/chrom.sizes";
 $targetSizes = $opt_targetSizes if ($opt_targetSizes);
 $querySizes = $opt_querySizes if ($opt_querySizes);
 
 $splitRef =  (`wc -l < $targetSizes` <= $HgAutomate::splitThreshold);
 
 # Establish what directory we will work in.
 if ($opt_buildDir) {