aa6447741ae61479b43cbd2b02182aa405487dab hiram Fri Sep 30 15:19:00 2022 -0700 can now read qSizes from file or URL refs #29819 diff --git src/hg/mouseStuff/netClass/tests/makefile src/hg/mouseStuff/netClass/tests/makefile index 1c20bb4..38359ed 100644 --- src/hg/mouseStuff/netClass/tests/makefile +++ src/hg/mouseStuff/netClass/tests/makefile @@ -1,13 +1,25 @@ NETCLASS=netClass ifneq ($(wildcard ../netClass),) NETCLASS=../netClass endif test: test0 +newStyle: test1 test2 + test0: ${NETCLASS} -verbose=0 -noAr dm6.apiMel4.noClass.net.gz dm6 apiMel4 stdout | gzip -c > dm6.apiMel4.net.gz @zdiff dm6.apiMel4.net.gz dm6.apiMel4.expected.net.gz @rm -f dm6.apiMel4.net.gz + +test1: + ${NETCLASS} -verbose=0 -noAr -qSizes=https://hgdownload-test.gi.ucsc.edu/goldenPath/apiMel4/bigZips/apiMel4.chrom.sizes dm6.apiMel4.noClass.net.gz dm6 apiMel4 stdout | gzip -c > dm6.apiMel4.net.gz + @zdiff dm6.apiMel4.net.gz dm6.apiMel4.expected.net.gz + @rm -f dm6.apiMel4.net.gz + +test2: + ${NETCLASS} -verbose=0 -noAr -qSizes=/hive/data/genomes/apiMel4/chrom.sizes dm6.apiMel4.noClass.net.gz dm6 apiMel4 stdout | gzip -c > dm6.apiMel4.net.gz + @zdiff dm6.apiMel4.net.gz dm6.apiMel4.expected.net.gz + @rm -f dm6.apiMel4.net.gz