6efc703aec6bbfaeb2c1550f1cb45b3771629f86 lrnassar Mon Oct 24 17:05:08 2022 -0700 Updating documentation from 'My Hubs' to the new name 'Connected Hubs' refs #29870 diff --git src/hg/htdocs/goldenPath/help/hubQuickStartGroups.html src/hg/htdocs/goldenPath/help/hubQuickStartGroups.html index f477e68..e06e87e 100755 --- src/hg/htdocs/goldenPath/help/hubQuickStartGroups.html +++ src/hg/htdocs/goldenPath/help/hubQuickStartGroups.html @@ -22,31 +22,31 @@ <pre><code>curl -O http://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubGroupings/hub.txt curl -O http://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubGroupings/genomes.txt<br> mkdir hg19 cd hg19 curl -O http://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubGroupings/hg19/trackDb.txt curl -O http://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubGroupings/hg19/examplePage.html </code></pre> <p> If you do not have curl, you can use a text editor and directly recreate the above three files.</p> <p> <b>Note:</b> there is now a <code>useOneFile on</code> hub setting that allows the hub properties to be specified in a single file. More information about this setting can be found on the <a href="./hgTracksHelp.html#UseOneFile" target="_blank">Genome Browser User Guide</a>.</p> <p> <strong>STEP 2:</strong> Paste your hub.txt link (<code>http://yourURL/hub.txt</code>) into the -<a href="../../cgi-bin/hgHubConnect" target="_blank">My Hubs</a> tab of the Track Data Hubs page, +<a href="../../cgi-bin/hgHubConnect" target="_blank">Connected Hubs</a> tab of the Track Data Hubs page, then click the "Genome Browser" link from the top bar. Alternatively build a URL that will directly load your hub in hgTracks:</p> <pre><code>http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg19&hubUrl=http://yourURL/hub.txt</code></pre> <p> The URL should work the same as using the original data just copied: <a href="http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg19&hubUrl=http://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubGroupings/hub.txt" target="_blank">http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg19&hubUrl=http://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubGroupings/hub.txt</a></p> <p> <strong>STEP 3:</strong> Congratulations! Your hub should display!</p> <p> If you are having problems, be sure all your files and the hg19 directory are publicly accessible. For hubs to work, your server must also accept byte-ranges. You can check using the following command to verify "Accept-Ranges: bytes" displays:</p> <pre><code>curl -I http://yourURL/hub.txt</code></pre>