1d898c9229d7e39bd62ace51dac43823a6a18212 chmalee Thu Oct 13 09:25:40 2022 -0700 Remove testing changes to buildTrix, refs #29811 diff --git src/hg/makeDb/trackDb/buildTrix src/hg/makeDb/trackDb/buildTrix index 3dc8bb0..79f5673 100755 --- src/hg/makeDb/trackDb/buildTrix +++ src/hg/makeDb/trackDb/buildTrix @@ -14,44 +14,38 @@ dbs="$@" # check if a database exists, print note and return non-zero if it doesn't dbExists() { local db="$1" local dbChk=$(hgsql -Ne 'show databases like "'$db'"') if [ -z "$dbChk" ] ; then echo "Note: database $db does not exist, skipping" return 1 else return 0 fi } buildDbTrix() { - set -x local db="$1" local trixName="$2" local metaDbName="$3" local cvRaPath="$4" local outPath="$5" local tmpFile=`mktemp`; local tmpFile2=`mktemp`; local tmpFile3=`mktemp`; makeTrackIndex $db $metaDbName $cvRaPath > $tmpFile; if test -s $tmpFile; then - ~/bin/x86_64/ixIxx -maxWordLength=64 $tmpFile $tmpFile2 $tmpFile3 + ixIxx -maxWordLength=64 $tmpFile $tmpFile2 $tmpFile3 chmod 664 $tmpFile2 $tmpFile3 - ~/bin/x86_64/trixContextIndex $tmpFile ${db}_${trixName} rsync -a $tmpFile2 $outMachine:$outPath/${db}_${trixName}.ix rsync -a $tmpFile3 $outMachine:$outPath/${db}_${trixName}.ixx - rsync -a $tmpFile $outMachine:$outPath/${db}_${trixName}.txt - rsync -a ${db}_${trixName}.offsets $outMachine:$outPath/${db}_${trixName}.offsets - rsync -a ${db}_${trixName}.offsets.ixx $outMachine:$outPath/${db}_${trixName}.offsets.ixx fi rm -f $tmpFile $tmpFile2 $tmpFile3 - set +x } for db in $dbs ; do if dbExists $db ; then buildDbTrix $db $trixName $metaDbName $cvRaPath $outPath fi done