4a57b140a286234b72b802aae6b9be52bf79ca5c hiram Wed Oct 12 08:29:35 2022 -0700 reset default name on Gene models track no redmine diff --git src/hg/utils/automation/asmHubTrackDb.sh src/hg/utils/automation/asmHubTrackDb.sh index c116a9b..04c0611 100755 --- src/hg/utils/automation/asmHubTrackDb.sh +++ src/hg/utils/automation/asmHubTrackDb.sh @@ -614,30 +614,31 @@ ln -s ../trackData/ncbiGene/$asmId.ncbiGene.ixx $buildDir/ixIxx/${asmId}.ncbiGene.ixx printf "track ncbiGene longLabel $longLabel shortLabel $shortLabel visibility pack color 0,80,150 altColor 150,80,0 colorByStrand 0,80,150 150,80,0 bigDataUrl bbi/%s.ncbiGene.bb type bigGenePred html html/%s.ncbiGene searchIndex name%s url https://www.ncbi.nlm.nih.gov/gene/?term=\$\$ urlLabel Entrez gene labelFields geneName,geneName2 +defaultLabelFields geneName2 group genes\n\n" "${asmId}" "${asmId}" "${searchTrix}" $scriptDir/asmHubNcbiGene.pl $asmId $ncbiAsmId $buildDir/html/$asmId.names.tab $buildDir/trackData > $buildDir/html/$asmId.ncbiGene.html haveNcbiGene="yes" fi # if [ -s ${buildDir}/trackData/ncbiGene/$asmId.ncbiGene.bb ] fi # if [ "${haveNcbiRefSeq}" = "no" ] ################################################################### ################################################################### # CpG Islands composite export cpgVis="off" # if there is no unmasked track, then set cpgVis to pack if [ ! -s ${buildDir}/trackData/cpgIslands/unmasked/${asmId}.cpgIslandExtUnmasked.bb ]; then cpgVis="on"