5e93998ad4e2934a13e49d2fe9c64c8251795fac
braney
  Wed Nov 16 12:19:22 2022 -0800
otto-mate the ClinVar Submissions track

diff --git src/hg/lib/clinvarSubBB.as src/hg/lib/clinvarSubBB.as
new file mode 100644
index 0000000..fbdc0f4
--- /dev/null
+++ src/hg/lib/clinvarSubBB.as
@@ -0,0 +1,34 @@
+table clinvarSubBB
+"ClinVar variant submission info plus some fields from clivarMain"
+    (
+    string chrom;        "Chromosome (or contig, scaffold, etc.)"
+    uint   chromStart;   "Start position in chromosome"
+    uint   chromEnd;     "End position in chromosome"
+    string name;         "Name of item"
+    uint   score;      "Score from 0-1000"
+    char[1] strand;    "+ or -"
+    uint thickStart;   "Start of where display should be thick (start codon)"
+    uint thickEnd;     "End of where display should be thick (stop codon)"
+    uint reserved;     "Used as itemRgb as of 2004-11-22"
+
+# from clinvarMain
+    lstring origName;         "Link to ClinVar with Variant ID"
+    string subGeneSymbol; "SubmittedGeneSymbol"
+    string molConseq;         "Molecular Consequence"
+    string snpId;         "dbSNP ID"
+
+# from clinvarSub
+    int varId;   "Variation ID"
+    string clinSign; "Clinical Significance"
+    string reviewStatus;   "Variant Review Status"
+    string dateLastEval;  "Date Last Evaluated"
+    lstring description; "Description"
+    lstring subPhenoInfo; "Submitted Phenotype Info"
+    lstring repPhenoInfo; "Reported Phenotype Info"
+    string revStatus; "Submission Review Status"
+    string collMethod;"Collection Method"
+    string originCounts; "Origin Counts"
+    string submitter; "Submitter"
+    string scv; "SCV"
+    lstring explOfInterp; "Explanation of Interpretation"
+    )