5e93998ad4e2934a13e49d2fe9c64c8251795fac
braney
  Wed Nov 16 12:19:22 2022 -0800
otto-mate the ClinVar Submissions track

diff --git src/hg/utils/otto/clinvar/doUpdate.sh src/hg/utils/otto/clinvar/doUpdate.sh
index 8a9ab46..442b649 100755
--- src/hg/utils/otto/clinvar/doUpdate.sh
+++ src/hg/utils/otto/clinvar/doUpdate.sh
@@ -1,9 +1,11 @@
 #!/bin/bash
 set -o errexit -o pipefail
 export PATH=$PATH:/cluster/bin/x86_64/ # for bedSort and bedToBigBed
 cd /hive/data/outside/otto/clinvar/
 if [ "$1" == "-nocheck" ]; then
         ./clinVarToBed --auto
+        ./clinvarSubLolly 0 
 else
         ./clinVarToBed --auto --maxDiff 0.1
+        ./clinvarSubLolly 0.1
 fi