File Changes for hiram

v439_base to v440_preview (2022-10-31 to 2022-11-07) v440

• src/hg/makeDb/doc/asmHubs/master.run.list
  • lines changed 2, context: html, text, full: html, text
    6782b9af94bab6f4541b408d67178c9388b942c9 Thu Nov 3 14:36:00 2022 -0700
    adding two assemblies per user request refs #29545
  • lines changed 1, context: html, text, full: html, text
    3d50d0ade2f9c4d01c9995a9b048037b90db0af1 Fri Nov 4 10:06:44 2022 -0700
    adding Bovine herpesvirus per user request refs #29545
• src/hg/makeDb/doc/asmHubs/updateGenArkCentral.sh
  • lines changed 4, context: html, text, full: html, text
    40f099b5e7ab52c9c734f164bdbdbc6e8da39d69 Fri Nov 4 10:12:24 2022 -0700
    indicate row count before and after update refs #29545
• src/hg/makeDb/doc/bacteriaAsmHub/bacteria.orderList.tsv
  • lines changed 1, context: html, text, full: html, text
    3d50d0ade2f9c4d01c9995a9b048037b90db0af1 Fri Nov 4 10:06:44 2022 -0700
    adding Bovine herpesvirus per user request refs #29545
  • lines changed 1, context: html, text, full: html, text
    eb089b54da47529d7279e3e5658a450f89e626bd Fri Nov 4 10:35:43 2022 -0700
    correctly place herpesvirus in viral set not bacteria refs #29545
• src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv
  • lines changed 2, context: html, text, full: html, text
    6782b9af94bab6f4541b408d67178c9388b942c9 Thu Nov 3 14:36:00 2022 -0700
    adding two assemblies per user request refs #29545
• src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt
  • lines changed 1, context: html, text, full: html, text
    4c8867def29289f46a7afa4e2c1ccdbbf68c70c1 Thu Nov 3 10:27:13 2022 -0700
    adding definition for GCF_024166365.1_mEleMax1_primary_haplotype no redmine
• src/hg/makeDb/doc/viralAsmHub/viral.orderList.tsv
  • lines changed 1, context: html, text, full: html, text
    eb089b54da47529d7279e3e5658a450f89e626bd Fri Nov 4 10:35:43 2022 -0700
    correctly place herpesvirus in viral set not bacteria refs #29545
• src/hg/utils/automation/asmHubGatewayPage.pl
  • lines changed 1, context: html, text, full: html, text
    e22f7956c30a5490adb028364bbc2c1e45b2da8b Wed Nov 2 16:17:28 2022 -0700
    turn off mouse strain bigMaf tracks since they do not work and now with the new style copy link to paste buffer feature for gateway description pages refs #30199
• src/hg/utils/automation/asmHubTrackDb.sh
  • lines changed 9, context: html, text, full: html, text
    e22f7956c30a5490adb028364bbc2c1e45b2da8b Wed Nov 2 16:17:28 2022 -0700
    turn off mouse strain bigMaf tracks since they do not work and now with the new style copy link to paste buffer feature for gateway description pages refs #30199