6b29a9f398148d8623c624dd4906d8e3087905c1 jcasper Fri Nov 4 13:34:18 2022 -0700 Should be checking human IDs against the human Xref table, refs #30231 diff --git src/hg/hgGene/hgGeneData/otherOrgs.ra src/hg/hgGene/hgGeneData/otherOrgs.ra index 56c0fdc..0ff6c0a 100644 --- src/hg/hgGene/hgGeneData/otherOrgs.ra +++ src/hg/hgGene/hgGeneData/otherOrgs.ra @@ -1,27 +1,27 @@ # This file contains info to process the homologous genes # in other species links. name human shortLabel Human tables hgBlastTab idSql select target from hgBlastTab where query = '%s' pepTable knownGenePep geneTable knownGene genomeUrl ../cgi-bin/hgTracks?org=Human&position=%s otherUrl https://www.ncbi.nlm.nih.gov/nuccore/%s?report=GenBank -otherIdSql select mRNA from KNOWNDB.kgXref where kgID='%s' +otherIdSql select mRNA from kgXref where kgID='%s' otherName GenBank priority 10 name mouse shortLabel Mouse tables mmBlastTab idSql select target from mmBlastTab where query = '%s' pepTable knownGenePep geneTable knownGene genomeUrl ../cgi-bin/hgTracks?org=Mouse&position=%s otherName MGI otherUrl http://www.informatics.jax.org/marker/%s otherIdSql select uniProt.extDbRef.extAcc1 from uniProt.extDbRef,uniProt.extDb,kgXref where uniProt.extDb.val = 'MGI' and uniProt.extDb.id = uniProt.extDbRef.extDb and uniProt.extDbRef.acc = kgXref.spID and kgXref.kgID = '%s' otherIdSql2 select kgXref.mRNA from kgXref where kgID='%s' priority 20