22b32cdaa6887807ed99855a69b1c76dc557357b
hiram
  Mon Nov 21 15:02:16 2022 -0800
updated one and added two VGP assemblies refs #29545

diff --git src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt
index 912eb24..b24e94d 100644
--- src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt
+++ src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt
@@ -1,260 +1,263 @@
 30522	GCA_003369685.2_UOA_Angus_1	mammals
 59729	GCA_003957525.1_bTaeGut1_v1.h	birds
 9244	GCA_003957555.2_bCalAnn1_v1.p	birds
 59729	GCA_003957565.2_bTaeGut1_v1.p	birds
 9244	GCA_003957575.1_bCalAnn1_v1.h	birds
 2489341	GCA_004011185.1_bStrHab1_v1.h	birds
 2489341	GCA_004027225.2_bStrHab1.2.pri	birds
 9258	GCA_004115175.2_mOrnAna1.alt.v3	mammals
 9258	GCA_004115215.3_mOrnAna1.pri.v3	mammals
 89673	GCA_004115245.1_mPhyDis1_v1.h	mammals
 59479	GCA_004115265.2_mRhiFer1_v1.p	mammals
 59479	GCA_004115295.1_mRhiFer1_v1.h	mammals
 63155	GCA_007364235.1_fArcCen1_v1.h	fish
 63155	GCA_007364275.2_fArcCen1	fish
 1825980	GCA_007399395.1_rGopEvg1_v1.alt	reptiles
 61383	GCA_007474575.1_mLynCan4_v1.alt	mammals
 28689	GCA_008658355.1_bAlcTor1_alternate	birds
 28689	GCA_008658365.1_bAlcTor1_primary	birds
 9771	GCA_008658375.1_mBalMus1_alternate	mammals
 42100	GCA_008692045.1_mPhoSin1.alt	mammals
 59729	GCA_008822115.3_bTaeGut2.mat.v3	birds
 59729	GCA_008822125.1_bTaeGut2pat	birds
 1196302	GCA_009651025.1_bCorMon1.alt	birds
 9704	GCA_009762295.1_mZalCal1.alt	mammals
 9704	GCA_009762305.1_mZalCal1.pri	mammals
 1203425	GCA_009762535.1_fNotCel1.pri	fish
 1203425	GCA_009762545.1_fNotCel1.alt	fish
 27794	GCA_009762595.1_rDerCor1.alt	reptiles
 685728	GCA_009764475.1_sPriPec2.pri	sharks
 685728	GCA_009764485.1_sPriPec2.alt	sharks
 121530	GCA_009764505.1_bTauEry1.alt	birds
 135433	GCA_009764545.1_bGeoTri1.alt	birds
 27794	GCA_009764565.1_rDerCor1.pri	reptiles
 135433	GCA_009764595.1_bGeoTri1.pri	birds
 121530	GCA_009769465.1_bTauEry1.pri	birds
 8869	GCA_009769485.1_bCygOlo1.alt	birds
 240206	GCA_009769505.1_bPteGut1.alt	birds
 8103	GCA_009769515.1_fCycLum1.alt	fish
 240206	GCA_009769525.1_bPteGut1.pri	birds
 8103	GCA_009769545.1_fCycLum1.pri	fish
 153643	GCA_009769595.1_bBucAby1.alt	birds
 153643	GCA_009769605.1_bBucAby1.pri	birds
 8869	GCA_009769625.1_bCygOlo1.pri	birds
 35005	GCA_009769695.1_rThaEle1.alt	reptiles
 54380	GCA_009819485.1_bCarCri1.alt	birds
 91951	GCA_009819505.1_bCatUst1.alt	birds
 80427	GCA_009819545.1_rLacAgi1.alt	reptiles
 57421	GCA_009819585.1_bMerNub1.alt	birds
 57421	GCA_009819595.1_bMerNub1.pri	birds
 108405	GCA_009819605.1_bSteHir1.pri	birds
 108405	GCA_009819645.1_bSteHir1.alt	birds
 48155	GCA_009819655.1_bSylAtr1.pri	birds
 8267	GCA_009819705.1_fHipHip1.pri	fish
 48155	GCA_009819715.1_bSylAtr1.alt	birds
 8267	GCA_009819745.1_fHipHip1.alt	fish
 9218	GCA_009819775.1_bPhoRub2.pri	birds
 9218	GCA_009819805.1_bPhoRub2.alt	birds
 54380	GCA_009819825.1_bCarCri1.pri	birds
 219594	GCA_009819845.1_bAytFul2.alt	birds
 409849	GCA_009829125.1_fPerMag1.pri	fish
 409849	GCA_009829135.1_fPerMag1.alt	fish
 36723	GCA_009829165.1_mMusErm1.alt	mammals
 296741	GCA_009829205.1_bChiLan1.alt	birds
 59729	GCA_009859025.1_bTaeGut2.p.v1.alt	birds
 59729	GCA_009859065.2_bTaeGut2.pri.v2	birds
 9771	GCA_009873245.2_mBalMus1.v2	mammals
 386614	GCA_010909745.1_sAmbRad1.alt	sharks
 386614	GCA_010909765.1_sAmbRad1.pri	sharks
 7757	GCA_010993595.1_kPetMar1.alt	otherChordates
 8010	GCA_011004835.1_fEsoLuc1.alt	fish
 8010	GCA_011004845.1_fEsoLuc1.pri	fish
 100784	GCA_011004865.1_bBalReg1.alt	birds
 100784	GCA_011004875.1_bBalReg1.pri	birds
 9483	GCA_011078405.1_mCalJac1.mat	primates
 9483	GCA_011100535.1_mCalJac1.pat	primates
 9483	GCA_011100555.1_mCalJac1.pat.X	primates
 9337	GCA_011100635.1_mTriVul1.pri	mammals
 9337	GCA_011100645.1_mTriVul1.alt	mammals
 61156	GCA_011750645.1_mArvNil1.mat	mammals
 61156	GCA_011762505.1_mArvNil1.pat.X	mammals
 9739	GCA_011762515.1_mTurTru1.pat	mammals
 9739	GCA_011762535.1_mTurTru1.mat	mammals
 61156	GCA_011762545.1_mArvNil1.pat	mammals
 9739	GCA_011762595.1_mTurTru1.mat.Y	mammals
 13146	GCA_012275265.1_bMelUnd1.mat	birds
 13146	GCA_012275275.1_bMelUnd1.pat	birds
 13146	GCA_012275295.1_bMelUnd1.mat.Z	birds
 48427	GCA_013368605.1_bNycGra1.pri	birds
 73324	GCA_014839755.1_bSylBor1.pri	birds
 118200	GCA_014839835.1_bDryPub1.pri	birds
 488313	GCA_015220805.1_bPogPus1.pri	birds
 10116	GCA_015244455.1_mRatBN7.1_alternate_haplotype	mammals
 8790	GCA_016128335.1_ZJU1.0	birds
 57068	GCA_016904835.1_bAcaChl1.pri	birds
 670352	GCA_017639485.1_bPluApr1.pri	birds
 52777	GCA_017639555.1_bCicMag1.pri	birds
 55661	GCA_017976375.1_bCucCan1.pri	birds
 8895	GCA_020740795.1_bApuApu2.pri.cur	birds
 243314	GCA_020745705.1_bHemCom1.pri.cur	birds
 1118847	GCA_020745775.1_bTheCae1.pri.cur	birds
 297711	GCA_020746105.1_bTroSur1.pri.cur	birds
 439704	GCA_020800305.1_bPorHoc1.mat.Z.cur	birds
 439704	GCA_020801775.1_bPorHoc1.pat.decon	birds
 64144	GCA_900324465.2_fAnaTes1.2	fish
 56716	GCA_900634415.1_fCotGob3.1	fish
 56716	GCA_900634435.1_fCotGob3.1_alternate_haplotype	fish
 441366	GCA_900634775.1_fGouWil2.1	fish
 64144	GCA_900650485.1_fAnaTes1.2_alternate_haplotype	fish
 441366	GCA_900650505.1_fGouWil2.1_alternate_haplotype	fish
 210632	GCA_900651595.1_fParRan2.1_alternate_haplotype	fish
 158456	GCA_900651605.1_fBetSpl5.1_alternate_haplotype	fish
 299321	GCA_900700345.2_fDenClu1.1_alternate_haplotype	fish
 205130	GCA_900700395.1_fMasArm1.2_alternate_haplotype	fish
 27687	GCA_900700845.2_fErpCal1.1_alternate_haplotype	fish
 8175	GCA_900880695.1_fSpaAur1.1_alternate_haplotype	fish
 173247	GCA_900963505.1_fEcheNa1.1_alternate_haplotype	fish
 113540	GCA_900964985.2_fSclFor1.1_alternate_haplotype	fish
 31033	GCA_901000745.3_fTakRub1.2_alternate_haplotype	fish
 194408	GCA_901001175.1_aRhiBiv1.1_alternate_haplotype	amphibians
 177155	GCA_901699155.1_bStrTur1.1	birds
 177155	GCA_901699155.2_bStrTur1.2	birds
 177155	GCA_901699165.1_bStrTur1.1_alternate_haplotype	birds
 161584	GCA_901709675.1_fSynAcu1.1	fish
 161584	GCA_901709685.1_fSynAcu1.1_alternate_haplotype	fish
 1415580	GCA_901765105.1_aMicUni1.1_alternate_haplotype	amphibians
 586833	GCA_902148815.1_fMyrMur1.1_alternate_haplotype	fish
 375764	GCA_902148825.1_fSphaOr1.1_alternate_haplotype	fish
 181472	GCA_902148835.1_fSalaFa1.1_alternate_haplotype	fish
 223781	GCA_902153765.1_bAquChr1.2_alternate_haplotype	birds
 8049	GCA_902167395.1_gadMor3.0_alternate_haplotype	fish
 29144	GCA_902362175.1_fChaCha1.1_alternate_haplotype	fish
 7604	GCA_902459445.1_eAstRub1.2_alternate_haplotype	echinoderm
 260995	GCA_902459495.1_aGeoSer1.1_alternate_haplotype	amphibians
 260995	GCA_902459505.1_aGeoSer1.1	amphibians
 390379	GCA_902500245.1_fThaAma1.1_alternate_haplotype	fish
 390379	GCA_902500255.1_fThaAma1.1	fish
 55149	GCA_902685485.1_mSciVul1.1_alternate_haplotype	mammals
 55149	GCA_902686455.1_mSciVul1.1	mammals
 7906	GCA_902713425.1_fAciRut3.1_maternal_haplotype	fish
 7906	GCA_902713435.1_fAciRut3.1_paternal_haplotype	fish
 37610	GCA_903797595.2_bEriRub2.2	birds
 111811	GCA_907165065.1_bCapEur3.1	birds
 30522	GCF_003369695.1_UOA_Brahman_1	mammals
 9244	GCF_003957555.1_bCalAnn1_v1.p	birds
 59729	GCF_003957565.1_bTaeGut1_v1.p	birds
 59729	GCF_003957565.2_bTaeGut1.4.pri	birds
 2489341	GCF_004027225.2_bStrHab1.2.pri	birds
 9258	GCF_004115215.2_mOrnAna1.pri.v4	mammals
 59479	GCF_004115265.1_mRhiFer1_v1.p	mammals
 89673	GCF_004126475.1_mPhyDis1_v1.p	mammals
 89673	GCF_004126475.2_mPhyDis1.pri.v3	mammals
 63155	GCF_007364275.1_fArcCen1	fish
 1825980	GCF_007399415.2_rGopEvg1_v1.p	reptiles
 61383	GCF_007474595.1_mLynCan4_v1.p	mammals
 61383	GCF_007474595.2_mLynCan4.pri.v2	mammals
 42100	GCF_008692025.1_mPhoSin1.pri	mammals
 59729	GCF_008822105.2_bTaeGut2.pat.W.v2	birds
 1196302	GCF_009650955.1_bCorMon1.pri	birds
 9704	GCF_009762305.2_mZalCal1.pri.v2	mammals
 1203425	GCF_009762535.1_fNotCel1.pri	fish
 27794	GCF_009764565.2_rDerCor1.pri.v3	reptiles
 27794	GCF_009764565.3_rDerCor1.pri.v4	reptiles
 35005	GCF_009769535.1_rThaEle1.pri	reptiles
 8103	GCF_009769545.1_fCycLum1.pri	fish
 8869	GCF_009769625.2_bCygOlo1.pri.v2	birds
 80427	GCF_009819535.1_rLacAgi1.pri	reptiles
 8267	GCF_009819705.1_fHipHip1.pri	fish
 219594	GCF_009819795.1_bAytFul2.pri	birds
 91951	GCF_009819885.1_bCatUst1.pri	birds
 91951	GCF_009819885.2_bCatUst1.pri.v2	birds
 409849	GCF_009829125.1_fPerMag1.pri	fish
 296741	GCF_009829145.1_bChiLan1.pri	birds
 36723	GCF_009829155.1_mMusErm1.Pri	mammals
 9771	GCF_009873245.2_mBalMus1.pri.v3	mammals
 386614	GCF_010909765.1_sAmbRad1.pri	sharks
 386614	GCF_010909765.2_sAmbRad1.1.pri	sharks
 7757	GCF_010993605.1_kPetMar1.pri	otherChordates
 8010	GCF_011004845.1_fEsoLuc1.pri	fish
 9337	GCF_011100635.1_mTriVul1.pri	mammals
 61156	GCF_011762505.1_mArvNil1.pat.X	mammals
 9739	GCF_011762595.1_mTurTru1.mat.Y	mammals
 13146	GCF_012275295.1_bMelUnd1.mat.Z	birds
 7936	GCF_013347855.1_fAngAng1.pri	fish
 8005	GCF_013358815.1_fEleEle1.pri	fish
 118141	GCF_013368585.1_fMegCyp1.pri	fish
 51298	GCF_014108235.1_mMyoMyo1.p	mammals
 59472	GCF_014108245.1_mPipKuh1.p	mammals
 27622	GCF_014108415.1_mMolMol1.p	mammals
 9407	GCF_014176215.1_mRouAeg1.p	mammals
 120794	GCF_015220075.1_bFalRus1.pri	birds
 27675	GCF_015220235.1_mChoDid1.pri	mammals
 42514	GCF_015220715.1_fPygNat1.pri	fish
 72105	GCF_015220745.1_fSebUmb1.pri	fish
 10116	GCF_015227675.2_mRatBN7.2	mammals
 43150	GCF_015227805.1_bHirRus1.pri.v2	birds
 8469	GCF_015237465.1_rCheMyd1.pri	reptiles
-8469	GCF_015237465.2_rCheMyd1.pri.v2	green sea turtle (v2 2021)
+8469	GCF_015237465.2_rCheMyd1.pri.v2	reptiles
 8839	GCF_015476345.1_ZJU1.0	birds
 8839	GCF_015476345.1_ZJU1.0	birds
 9261	GCF_015852505.1_mTacAcu1.pri	mammals
 9031	GCF_016699485.2_bGalGal1.mat.broiler.GRCg7b	birds
 9031	GCF_016700215.1_bGalGal1.pat.whiteleghornlayer.GRCg7w	birds
 9031	GCF_016700215.2_bGalGal1.pat.whiteleghornlayer.GRCg7w	birds
 13397	GCF_017639515.1_sCarCar2.pri	sharks
 148594	GCF_017639655.1_bFalNau1.pat	birds
 148594	GCF_017639655.2_bFalNau1.pat	birds
 1250792	GCF_017639745.1_fMelBoe1.pri	fish
 109905	GCF_017976325.1_fCheRos1.pri	fish
 941984	GCF_017976425.1_fToxJac2.pri	fish
 34773	GCF_018492685.1_fAloSap1.pri	fish
 33562	GCF_019393635.1_mDroGli1.pri	mammals
 75038	GCF_020382885.2_fScaArg1.pri	fish
 9447	GCF_020740605.2_mLemCat1.pri	mammals
 51337	GCF_020740685.1_mJacJac1.mat.Y.cur	mammals
 134902	GCF_020740725.1_bCorHaw1.pri.cur	birds
+8895	GCF_020740795.1_bApuApu2.pri.cur	birds
 208333	GCF_021462225.1_DD_fGirMul_XY1	fish
 99487	GCF_024166365.1_mEleMax1_primary_haplotype	mammals
+286002	GCF_025201925.1_rGopFla2.mat.asm	reptiles
 8154	GCF_900246225.1_fAstCal1.2	fish
 64144	GCF_900324465.2_fAnaTes1.2	fish
 205130	GCF_900324485.2_fMasArm1.2	fish
 223781	GCF_900496995.1_bAquChr1.2	birds
 223781	GCF_900496995.4_bAquChr1.4	birds
 56716	GCF_900634415.1_fCotGob3.1	fish
 210632	GCF_900634625.1_fParRan2.1	fish
 441366	GCF_900634775.1_fGouWil2.1	fish
 158456	GCF_900634795.2_fBetSpl5.2	fish
 158456	GCF_900634795.3_fBetSpl5.3	fish
 299321	GCF_900700375.1_fDenClu1.1	fish
 27687	GCF_900747795.1_fErpCal1.1	fish
 8175	GCF_900880675.1_fSpaAur1.1	fish
 173247	GCF_900963305.1_fEcheNa1.1	fish
 113540	GCF_900964775.1_fSclFor1.1	fish
 31033	GCF_901000725.2_fTakRub1.2	fish
 194408	GCF_901001135.1_aRhiBiv1.1	amphibians
 8032	GCF_901001165.1_fSalTru1.1	fish
 161584	GCF_901709675.1_fSynAcu1.2	fish
 1415580	GCF_901765095.1_aMicUni1.1	amphibians
 181472	GCF_902148845.1_fSalaFa1.1	fish
 375764	GCF_902148855.1_fSphaOr1.1	fish
 586833	GCF_902150065.1_fMyrMur1.1	fish
 8049	GCF_902167405.1_gadMor3.0	fish
 29144	GCF_902362185.1_fChaCha1.1	fish
 7604	GCF_902459465.1_eAstRub1.3	echinoderm
 260995	GCF_902459505.1_aGeoSer1.1	amphibians
 390379	GCF_902500255.1_fThaAma1.1	fish
 6579	GCF_902652985.1_xPecMax1.1	molluscs
 9657	GCF_902655055.1_mLutLut1.2	mammals
 30640	GCF_902686445.1_mSciCar1.2	mammals
 7906	GCF_902713435.1_fAciRut3.1_paternal_haplotype	fish
 1047088	GCF_903992535.1_mArvAmp1.1	mammals
 1047088	GCF_903992535.2_mArvAmp1.2	mammals
 38674	GCF_903995425.1_mOncTor1.1	mammals
+60746	GCF_903995435.1_mAcoRus1.1	mammals
 8177	GCF_904848185.1_fAcaLat1.1	fish
 91739	GCF_905147365.1_ilAriAges1.1	insects
 116150	GCF_905163445.1_ilParAegt1.1	insects
 8384	GCF_905171765.1_aBufBuf1.1	amphibians
 8407	GCF_905171775.1_aRanTem1.1	amphibians
 9860	GCF_910594005.1_mCerEla1.1	mammals
 8240	GCF_910596095.1_fThuMac1.1	fish
 8236	GCF_914725855.1_fThuAlb1.1	fish