8a48909099f3b349c33c99244d63530d2a9832e6 hiram Mon Nov 28 14:45:30 2022 -0800 relaxing the limits for fish legacy an VGP assemblies refs #29545 diff --git src/hg/makeDb/doc/asmHubs/verifyOnDownload.sh src/hg/makeDb/doc/asmHubs/verifyOnDownload.sh index 4b690f1..bbf8a85 100755 --- src/hg/makeDb/doc/asmHubs/verifyOnDownload.sh +++ src/hg/makeDb/doc/asmHubs/verifyOnDownload.sh @@ -9,39 +9,43 @@ printf "apibeta.soe.ucsc.edu - to use the hgwbeta server\n" 1>&2 exit 255 fi # printf "usage: ./verifyOnDownload.sh \n" 1>&2 # ${toolsDir}/mkSendList.pl ${orderList} | while read F; do \ # ${toolsDir}/verifyOnDownload.sh $$F < /dev/null; done export host=$1 export orderList=$2 export successCount=0 export doneCount=0 export fileName=`basename $orderList` export subset=${fileName%.orderList.tsv} -export minTrackCount=12 +export minTrackCount=11 if [ "${subset}" == "invertebrate" ]; then minTrackCount=9 elif [ "${subset}" == "bacteria" ]; then minTrackCount=9 +elif [ "${subset}" == "legacy" ]; then + minTrackCount=9 elif [ "${subset}" == "plants" ]; then minTrackCount=11 elif [ "${subset}" == "birds" ]; then minTrackCount=11 +elif [ "${subset}" == "fish" ]; then + minTrackCount=11 elif [ "${subset}" == "mammals" ]; then minTrackCount=9 elif [ "${subset}" == "vertebrate" ]; then minTrackCount=11 elif [ "${subset}" == "archaea" ]; then minTrackCount=9 elif [ "${subset}" == "viral" ]; then minTrackCount=7 fi # printf "# DBG subset '%s' min: %d\n" "${subset}" "${minTrackCount}" 1>&2 export dbHost="localhost" export hubSource="hgdownload-test.gi.ucsc.edu" if [ "${host}" = "apibeta.soe.ucsc.edu" ]; then